Salmo salar (Atlantic salmon): 106587677
Help
Entry
106587677 CDS
T04363
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106587677
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
106587677
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106587677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_33
TIP49
AAA_14
Rad17
ABC_tran
AAA_11
nSTAND3
bpMoxR
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
106587677
NCBI-ProteinID:
XP_014031736
UniProt:
A0A1S3PVP4
LinkDB
All DBs
Position
ssa26:complement(33548749..33560110)
Genome browser
AA seq
762 aa
AA seq
DB search
MEEEEVSLRVLPMDPGDRGTQRVRLGPGLMSSLGLGLGSPVLVALSGGSCLCTAWPRPDL
ADGFIQIDMKCCSSTLILNKATPTHLSSSPLPPGPCLSPSLTPVSCPKLKGIRITVVVQS
VEFRKTTPPSFIHELVKDMLKGTYVHQKHVIDVGDYDTDIKLIVIESLNPESTVTGLVTS
KTGVEIMGTRTLRYYRGQLQEQPQVLLGGLEEVSACLREMLRLPLQYPATLGSLGLSCPR
GVLLAGPPGVGKTLLVRCLVGEVGANLITVRGPEVVGSRPGESEERLRAVFGRARAAAEE
GPCVLFLDELDSLCPRRTGSSAPENRLVAQLLTLMDGMDQSDRFLIVGATNQPDSLDPAL
RRPGRFDREVVIGAPTAQQRLSILSVLCRAMPVCVSVDWAELAQRTTGYVGADLSALCRE
AAMLAIRHNTQGSGEQAITMEHFLSALKTVRPSCLRGSLGRTDLPAVSWEQIGGLEEVKV
KLQQSIEWPMRYPEAFVRLGLSRPRGVLLYGPPGCAKTTLVRAAATSSHCSFLSVSGADL
YSPYVGDSEKALAQLFRQARACAPSILFLDEVDSLIGSRSEGYVPQSAQTRLLSVLLNEL
DGVGFRTLERRGAGKTLQAERVEERHQQEHLEYQEVCNKEVMIVAATNRPDSLDSALLRP
GRLDQIIYVPPPDLQARVSILQVCTEKMPLDDDVCLEQLARHTDLYSGADLENLCREAAL
LTLQDEGMEASSIKHRYFLQSLQRMTPSLSTQQLQTYKNLFR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaggtgtctctgagagtgctgccaatggacccaggggaccggggaacc
cagagggtcagactgggcccagggctgatgtcctccctggggttggggctgggctctcct
gttctggtggctctgtctggagggtcctgtctctgtactgcctggcccaggcctgacctg
gctgacggattcatacagatagacatgaaatgttgttcttcaactcttatcttaaacaaa
gcgacacccacacacctcagctctagcccacttccccccggcccatgcctaagtcctagc
ctcaccccagtctcctgccccaagctgaaaggcatcagaataacagtggtggttcagagt
gtggagttccggaaaaccactcctcccagtttcatccatgaactagtgaaggacatgctg
aaagggacatatgtccaccagaagcacgtgatagatgtgggtgactatgacacggacatt
aaactgatcgtcatcgagagcctgaacccagagtccaccgtgactggtttggttacatct
aagacaggggtggaaataatggggacgaggaccctccggtactacagaggacagctccag
gagcagccccaggtcctgctgggaggactggaggaggtgtcagcgtgtctgagagagatg
ttgcgcctgcctctgcagtaccctgctaccctgggctccctgggtctgtcctgccccaga
ggggtgctccttgctgggccgccgggggtcggaaagaccctgctggtccgctgcctggtg
ggggaggtgggggccaacctcatcacagtcagaggaccagaggtagtagggtctcggcca
ggggagagtgaggagaggttgcgggcggtgtttggtcgggcgcgggcagcggcagaggaa
gggccttgtgtgttgttcctggatgagctggactctctctgtcccagacggactggatcc
tccgcacccgagaaccggctggtcgctcaactgctcacgctcatggacggcatggaccaa
tcagatcgcttcctcattgtaggagccactaatcagccggacagcttggacccggcgcta
cggcggcccgggaggttcgacagagaggtggttatcggtgcccccacagcacagcagcgg
ttatccatcctctcagtgctgtgcagggccatgccagtgtgtgtcagtgtggactgggca
gagctggcccagaggactacagggtatgtgggtgctgacctcagtgctctctgccgtgag
gctgccatgctggctatacgacacaacacacagggttcaggggagcaggctatcaccatg
gaacacttcctgtctgccctgaagactgtccgtccatcctgtctgaggggcagtctggga
cggacagatctcccagccgtctcctgggaacagataggaggcctggaggaagtcaaagtc
aaactacaacagagtatagagtggccgatgcgttacccggaggcgtttgtgcgtctgggt
ctgtcccgtcccaggggggtgttgctgtacggtcccccaggctgtgctaagaccaccctg
gtcagggctgcagccacctcctcccactgctccttcctgtcagtcagcggggctgacctc
tactctccatatgtaggagactcggagaaggccctggctcagctctttcgtcaggcacgg
gcctgtgctccctccatcctgttcctggatgaggtggactctctgattggctcccggtca
gaaggctatgtccctcagagtgcccagacccgcctcctgtctgtgctgctgaatgagctg
gacggggtaggctttaggaccctggagaggagaggagcagggaagaccctacaggctgag
agagtggaggagcgccaccaacaggaacatttggagtaccaggaggtgtgtaacaaggaa
gtgatgatcgtagcggccactaacagaccagactctctggacagtgccctcctaaggcct
ggaagactggaccagataatctacgtacccccacctgacctacaggcacgtgtgtccatc
ctgcaggtgtgtacagagaagatgcctctggatgatgatgtgtgtctggagcagctggct
agacacactgacctctactctggagcagacctggagaacctgtgcagagaggcggctctg
ttgaccctccaggatgaaggtatggaagcttctagtatcaaacaccgatacttcctccag
tctttacagaggatgactccctctctctcgacccagcaactacagacatacaaaaacctc
ttcagatga
DBGET
integrated database retrieval system
