Salmo salar (Atlantic salmon): 106590946
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Entry
106590946 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106590946
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106590946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106590946
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106590946
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
106590946
NCBI-ProteinID:
XP_014037598
UniProt:
A0A1S3QC88
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Position
Un
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AA seq
1413 aa
AA seq
DB search
MGLLPGQPPPFLLIFLLFLSSLPPLLSRPLILHPSINVAVMFSGSAYQNEVRGRLSRENF
ADLPLEVNPVTVLVNDTNPRALLTRLCQTMATEKLHGVVFEDDVGSGAGPQVAEVAQILD
FLSTQTALPIIGISGGSAVVIPHKAEGSTFLQMGASLEQQIVCMFKLMEEYDWGDFVVIT
SMLPGYETFVDYVRSYTDTSYFLWRLQDILSLEMSIGTSDVRAKRMLQQIDSQVLVAYCS
HEEAQYLFQVAGEVGLLGPGYIWILPSLALGNTESPSPSSFPIGVIGVITDQWRKSLRQR
VREGVAIVAKGAESFKRHQGFVPEGHSDCNTPVTHINNNTLFRHMLNVTWERKDLSFNSD
GYLTNPSMVIIALNRDRQWDKVGTLERGILQVRYPVWPRYGSFLEPVSDDRHLTVATLEE
RPFVIVENVDPDTGTCVRNTVPCRRQSNRTESLVGHSEPYTKLCCKGFCIDILKKLSRTI
KFSYDLYLVTNGKHGKMISGIWNGMIGEVFYRKADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSA
KAAGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAA
FMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQR
GVEDALNSLKTAKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRW
KRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFSWEHLLYWKLHKELDKSPRMDFLLAISRGIYSCFNGVEEPDLPNLANPDLTANYAQ
ANMLKMLRTAKDLVNSAQVETSLDHATKTIEHWGRHGGSLPVHIPQQGTTETVPGGFAYV
TENTHLPPERPLSPQYCTLGVVTSVNQQRGLARPTPLRYTLPARTSSLYDRPLPVSSLIC
PHLDLAGGDRLASYPHPSTGRLYVDPQHLSHPRSPFIPYSELQFPDIYLSSHPPSAVSHP
PHTEPSRRKRRSKSLLSGETGRGGGQRRRHREEKKVCLAELRANHLQENHVSPHMPDSLY
PGAVLCPGEEGCGGSWPLPLEELVLAGRRRLHRRPSFLRATWGSEQIRQPDDTPPTSLDS
QSHSALPDLFPYVMVDQETPTKLYNPTPFRNNLCYPAASPRQHAYLHIRQDQRKGNSRKK
LRHSHSTHLPTYREAVLGGQGGGGGVGLGVVRRTTSLLSRQYNDYLTSYPGLPLYHSPLN
LQAHSPASSNHPSPGTYRIPSPVCQLLACGGGCRSQRGLLYQDSLYGAYGAYRGAQDSGL
EPQSGEGSVGLRSEDRPCVTRPWGKVSSLESEV
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttcttccaggacagcctcctcctttcctcctcatcttcctcctcttcctctcc
tcccttcctcccctcctctcccgtcctctcatcctccatccttctattaatgtagcagta
atgttcagtggctctgcttaccagaatgaggtcaggggtcgtttgagcagagagaacttc
gctgatcttcccctagaggtgaacccggtcactgttttggttaatgacaccaaccctcgc
gccctgctgacgcgtctctgtcaaaccatggcgacagagaaactgcatggagtcgtgttc
gaggacgatgtgggatcaggagctggacctcaggtggcagaagtggctcagatcctggac
ttcctgtcaactcagacagctctacccatcattggcatcagtggaggatctgccgttgtc
ataccgcacaaggctgagggttccacgttcctccagatgggtgcatcactggaacagcag
attgtctgcatgttcaagttgatggaggagtatgactggggagactttgtagtcatcaca
agcatgttgccgggatacgagacatttgtggactacgtccgctcctacacggacacttcc
tacttcctgtggaggctgcaggatatcctgtctctggagatgtctatcgggaccagcgac
gtccgcgccaaacgcatgttacagcagattgattcccaggtactcgtagcctactgctcc
catgaggaggcccagtacctgttccaggtagcaggggaggtgggtctattggggcctggc
tacatctggatcctcccctccctcgcgttgggcaacacagagagcccttcacctagcagc
ttccccataggagtgattggcgtcatcaccgaccaatggaggaagagcctgaggcagcgg
gtcagagagggagtggccatagtggccaaaggggcggagagtttcaagaggcatcagggg
ttcgttcccgagggacacagcgactgcaacacaccagttacacacattaacaacaacaca
ctgttcagacacatgctgaacgtgacatgggagcgtaaggacctgtcgtttaatagtgat
ggttacctgacaaacccttccatggtcatcatcgctctgaacagagacagacagtgggac
aaggtggggacattagagcggggtatcctccaggtgcgttatccggtgtggcctcgatat
ggcagtttcctcgagccggtatcagatgatcgccacttgacggtagccactctggaggag
aggccctttgtcattgtagagaacgtggaccccgacacgggcacctgtgtacgcaacact
gtgccctgccgacgccaatccaaccgcactgagagtcttgtgggtcactcggagccctac
accaagctgtgctgtaaggggttctgcatcgacattctgaagaagctgtctcgcaccatc
aagttctcctacgacctctacctggtcactaacgggaaacatggaaagatgatcagtggc
atctggaacggcatgatcggagaggtgttctataggaaagcagacatggccataggttct
ctcaccataaatgaggagcgttctgagatcatcgacttctccgtgcccttcgtcgagacc
ggcatcagcgtcatggttgcccgtagcaatgggactgtctccccctccgccttcctcgag
ccctatagcccagcggtgtgggtgatgatgtttgtaatgtgcctgaccgtggtagctgtg
accgtattcgtgttcgagtacttcagtcctgtcggctacaaccgcagcttggtcagcgct
aaagcggcaggaggtcctaccttcaccatagggaagtcagtgtggttgctttggggcatc
gtgttcaataactcggtccccatcgagaaccctaaaggaaccaccagtaagatcatggtg
ctggtgtgggccttcttcgcggtcatcttcctggcctcctacaccgccaacctggctgcc
ttcatgatccaggagcagtacatagacactgtgtctggactgtctgacaagaagttccag
aagcctcaggagcactaccctccattccggtttgggacggtccctaacggcagcacagag
aggaacatcaggagtaactaccccgacatgcacacacacatggtcaaatacaaccagaga
ggagtggaggatgccctcaacagccttaagacagcgaagctggatgcttttatctatgat
gctgcggtgttgaactacatggcagggaaggacgagggctgtaagcttgtgaccattggc
tctgggaaggtgtttgctacaacgggctacggtatcgccctgcagaaagactcccgatgg
aaacggccaattgacctggcattattgcagttcctgggagacggtgacacccagcgcttg
gagacggtctggctgtcaggcatctgtcagaatgagaagaacgaggtgatgagcagtaag
ctggacatagacaacatggccggggtcttctacatgctgctggtggccatggggctcagt
ctgctggtgttctcctgggaacatctactctactggaaacttcacaaggaactagacaag
tctcccaggatggacttcctgctcgccatcagcaggggtatctacagttgcttcaacggg
gtggaggaaccagacctccctaacctggccaacccagacctgacagctaactatgcccag
gctaacatgctcaagatgctacgcactgctaaggacctggttaactctgcccaagtcgag
acctcactagaccacgccaccaagaccatagaacactggggacgccatggcggcagcctg
cctgtccacattccgcagcaaggcaccacggaaacagtcccgggagggttcgcttatgtc
acagagaatacacacctgccccccgagcgccccctcagcccacaatactgcacgctgggt
gtagtaacatctgtgaaccagcagagggggctggcgagacccacaccgctacgatacacg
ctcccggctcgtacttcctctctctacgacagaccacttcctgtttctagtctcatttgt
cctcaccttgacctggctgggggggaccgcctcgcttcttaccctcacccctccacaggt
aggctctatgtggacccccaacatctttcccacccccgctctcccttcatcccctatagt
gagctccagttcccagacatctacctctcctctcacccaccctctgctgtctcccatccc
ccccacacagagccctccaggaggaagaggaggagcaagagcctcctctcaggggagaca
ggaagaggaggaggacagaggaggcggcacagggaggagaagaaggtgtgcctggctgaa
ctccgggccaaccacctccaggaaaaccatgtctcaccccacatgcctgactccctgtac
ccaggagcggtgctctgtcctggggaagagggctgcggtggctcctggcctcttcctctg
gaggagctcgtcctagcaggcagacggcgcctccaccgacggccatctttccttcgagcc
acctggggcagtgagcagattcgccagccggacgatactccgcctacatccctcgatagc
caatcacattctgctttaccagacttatttccctacgtcatggtcgaccaagaaactccc
actaaactctacaaccccaccccgttccggaacaacctatgctatcctgccgcctcaccc
cgccaacatgcctatcttcatataaggcaggaccagaggaaaggaaactcacgtaagaag
ctgcgacactcacactccacccacctgcccacctacagggaggccgtgctggggggccag
ggagggggaggtggggtaggcctgggggtggtccggagaaccaccagcctgctcagcaga
cagtacaacgactatctaacctcctaccctgggctgcctctataccacagccccctcaac
ctccaggcccattccccggcatccagcaaccaccccagccctggcacctaccgtatcccc
agccctgtatgccagcttctggcctgtggagggggctgtcgaagtcagagggggttgttg
taccaggacagtctgtatggagcctatggagcctatcgaggggcccaggattcgggctta
gagccccagagtggagagggctcagtagggttgaggtctgaggacagaccctgtgtgacc
cggccctggggaaaagtctctagtctggagtcagaagtctga
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