Salmo salar (Atlantic salmon): 106602547
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Entry
106602547 CDS
T04363
Symbol
glb1
Name
(RefSeq) galactosidase beta 1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00052
Galactose metabolism
sasa00511
Other glycan degradation
sasa00531
Glycosaminoglycan degradation
sasa00600
Sphingolipid metabolism
sasa00604
Glycosphingolipid biosynthesis - ganglio series
sasa01100
Metabolic pathways
sasa04142
Lysosome
Module
sasa_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
106602547 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
106602547 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106602547 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
106602547 (glb1)
00511 Other glycan degradation
106602547 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106602547 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106602547 (glb1)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
106602547 (glb1)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106602547 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
106602547
NCBI-ProteinID:
XP_014050704
UniProt:
A0A1S3RG06
LinkDB
All DBs
Position
ssa04:18371170..18379187
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AA seq
650 aa
AA seq
DB search
MACSRVGVVLLCSLFASTLGVPPTFSVDYKNDCFRKDGEEFRYISGSIHYNRIPRAYWKD
RLLKMYMAGLNAIQTYVPWNFHEPSSDQYNFSGDRDLEHFLQLAQDIGLLVVLRPGPYIC
GEWDMGGLPAWLLHKKDIVLRSSDPDYIAAVDKWMGMLLPILKPFLYQNGGPIITVQVEN
EYGSYFACDYNYLRHLTSLFRSHLGNDVVLFTTDGAGAGYLKCGSLQGLYATVDFGPGGN
VSAAFDAQRQAEPHGPLVNSEFYTGWLDHWGEHHSTVSTAIVAKSLNEILAIGASVNLYM
FIGGTNFGYWNGANTPYAPQPTSYDYDAPLTEAGDLTDKYFAIQDVIKLYRKIPEGPVLP
STPKYAYGAVPMKKLHTVVDALDILSFSGPVKSIYPLTFIEMNQLFGFVLYQTKLPVDCS
KPTPLSSPLNGVHDRAYVSVDGVAAGILERDKALTINVTGKAGSQVDILVENMGRVNYGK
DINDFKGLVSNLTLGADILTGWEVYSLSIDQAVSQGLLWEMGSREAGIPPPSPLSVPSFY
GGTFVIPDGIPDLPQDTYIQFPDWRKGQVWINGFNLGRYWPARGPQITLYVPASILSTAA
PNNVTVLELEGDPCTPGPCTVEFANTPVLNATAKSDHKHQRALFHKEDLL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctcaagggttggagttgtgctactgtgttccctctttgcaagtacacttggt
gtgccgccgaccttcagtgtggactacaagaacgactgcttccgtaaggatggggaagag
ttccgctacatctccggtagcatccactacaacaggatccccagggcctactggaaagac
aggctactcaagatgtatatggccggactgaacgccattcagacgtacgtcccctggaat
ttccacgagccctcctcggatcagtacaacttcagtggggacagggatctagaacacttc
ctgcagttggcccaagacattggtctgctggttgtactgaggcctgggccctacatctgt
ggagagtgggatatggggggtttgcctgcctggctgctccacaagaaagacattgtcctg
cgttcctcagacccagattacattgcggctgttgacaagtggatgggcatgctactgcca
attttgaagccgttcctttatcagaacggcggcccaatcatcactgttcaggtggagaat
gagtacggaagctactttgcctgtgactacaactacctgcgtcacctgaccagtctgttc
cgctcccacctggggaacgacgtggtgctattcaccacagacggggccggggccgggtac
ctcaagtgtggctctctgcagggcctctacgccactgtggacttcggcccaggtgggaat
gtgtctgctgcatttgatgcacagagacaggcagagccccatggacccttggtgaactct
gagttctacaccggctggctggaccactggggagagcatcactctacagtgtccaccgcc
atcgtggccaagtccctcaacgagatcctcgccatcggcgccagcgttaatctatacatg
tttattggaggaaccaattttggatactggaatggagccaataccccctatgccccccag
cctactagttatgactatgacgccccgctcactgaggcaggagacctcactgacaagtat
tttgccatccaggatgtcatcaaactgtatcggaagataccagagggacccgtgcttcca
tcaacacctaaatatgcctacggagctgtaccaatgaagaagctccacacagtagtcgat
gctctagatatactatccttctccggtcctgtcaaaagcatctacccgctgaccttcatt
gagatgaaccaactgtttgggttcgtcctctatcagaccaagctgcctgtggactgcagt
aagcccacccctctgtcctcaccactgaatggagtccacgaccgggcatatgtatcagtc
gacggggttgctgctgggattctagagagggacaaggccctgactatcaacgtgactggg
aaggctgggagtcaggtggacatactggtggagaatatgggccgagtcaactatgggaaa
gacatcaacgactttaagggcctggtgtctaacctgacattgggggctgacatcctcacc
ggctgggaagtctacagcctcagcatcgaccaggctgttagccagggtcttctctgggag
atgggctccagggaagctggcatcccaccaccttctcccctctccgtcccctccttctat
gggggcacctttgtcatcccggacggcatcccagacctgccccaggacacctacatccag
ttccctgactggagaaagggccaggtgtggatcaacggtttcaacctgggccgctactgg
cccgctcgcggcccacaaatcaccttgtacgtgcctgctagcatcctgagcacagccgcg
cccaacaacgtgaccgtcctggagctggagggagacccatgcacccccgggccctgtacc
gtggagtttgccaacaccccggtcctgaatgccacggctaagtctgaccacaaacaccag
agggcgttgttccataaagaggatctcttatga
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