Salmo salar (Atlantic salmon): 106605487
Help
Entry
106605487 CDS
T04363
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00310
Lysine degradation
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106605487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106605487
03036 Chromosome and associated proteins [BR:
sasa03036
]
106605487
Enzymes [BR:
sasa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
106605487
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106605487
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
106605487
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106605487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2HE
zf-C2H2_6
zf-C2H2_11
Zn-ribbon_8
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
106605487
NCBI-ProteinID:
XP_014056682
UniProt:
A0A1S3RXR2
LinkDB
All DBs
Position
ssa05:61650415..61657729
Genome browser
AA seq
554 aa
AA seq
DB search
MGTEPPQPFLEELTEKVVFLRDGSTADTHSGEQEGLGDKEGQSEATSSTSGGETERSTQG
GGADTPALTQRGTPLLHPKPSTSGLSKREWLERQKALNTYKRGRNLRDRPRITYTEEEVP
KDDHYLYCEDCKSFFMEECELHGPAFFVPDIPVPLGAPDRARLTLPSGLEVRTSGIPEAG
LGVFNQGNTVPAGAHYGPYEGEITDKDQAMESGYSWVIYKSRHWDDYIDAGRDTHSNWMR
YVNCARSEEEQNLVAFQYRGGILYRCCKPIAVGEELLVWYGGEYARDLGIVFDYLWDKKS
SAKDVNVESFQIFSCSGCPLSFTSQIFLLKHIKRCHHDEYVRLLRSGEIRSENLMSSSSS
QHHGSTTGSFNPAPTRKQRETDKPRPHRCSQCGKSFTTGRNLIIHQRIHTGEKPFHCSQC
GRSFSRSGPLKTHQRIHTGEKPFHCSQCGRSFSQSGDLKTHQRIHTGEKPFHCSQCGRSF
SQSGDLKTHQRIHTGEKPFHCSQCGRSFSQSGPLKTHQRIHTGEKPFHCSQCGRSFSQSG
NLKKHKCSKKSKEL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggggacagaaccaccccagccattcctggaggagctgactgaaaaagtggtcttcctc
agagacggcagcacagcagacacacacagtggagaacaggaggggctaggagacaaggag
ggtcagagtgaagcaacctccagcaccagtggaggggagacagagcgttccactcaggga
ggaggggcagacaccccagctctcactcagagggggactcccttgttgcaccccaaacca
tcaacctcaggtctgtctaagagagagtggctggaaaggcagaaagcactaaacacatac
aagcgcggtagaaacctgagagacagaccaagaatcacttacacagaggaggaggtcccc
aaagatgaccactacctctactgtgaggactgcaagtcttttttcatggaggagtgtgag
cttcatggtcctgccttcttcgtccctgacatccctgtccccttaggagcccctgatagg
gccagactcaccctgccatccggcctggaggtcaggacatccggcatccctgaagcagga
ctgggtgtgttcaaccaaggaaacactgtgcctgcaggagcccactatggaccttatgaa
ggagagatcacagacaaggaccaggccatggagagtggatactcctgggtgatctacaag
agcagacactgggacgactacattgatgctgggagagacactcactccaattggatgagg
tatgtgaactgtgctcgtagtgaagaagaacagaatctggtggccttccagtacagagga
gggattctgtaccgctgctgtaagcccatagctgttggagaggagctgttggtttggtac
ggaggggagtacgccagagacctgggcattgtcttcgactacctctgggacaaaaagagc
tctgctaaagatgtgaacgttgagtctttccagatcttctcgtgctctggctgtccgctc
tccttcacctctcagatcttcctcctcaagcacataaagagatgtcaccatgatgagtat
gtcagactgttgaggagtggagagatcagatcagagaatctcatgtcctccagcagctca
caacaccatggaagcactacaggttcattcaacccagctcccaccaggaaacagagagag
acggacaagccacgaccacaccgttgttctcagtgtgggaagagcttcacaacagggaga
aatctcatcatacaccagcgcattcacacaggagagaagccgtttcactgctctcagtgt
gggaggagcttcagtcggtcaggacctctaaagacacaccagcgcattcacacaggagag
aagccgtttcactgctctcagtgtgggaggagcttcagtcagtcaggagacttaaagaca
caccagcgcattcacacaggagagaagccgtttcactgctctcagtgtgggaggagcttc
agtcagtcaggagacttaaagacacaccagcgcattcacacaggagagaagccgtttcac
tgctctcagtgtgggaggagcttcagtcagtcaggacctctaaagacacaccagcgcatt
cacacaggagagaagccgtttcactgctctcagtgtgggaggagcttcagtcagtcagga
aatctaaagaaacacaagtgttctaaaaagagtaaagaactttag
DBGET
integrated database retrieval system
