Salmo salar (Atlantic salmon): 106607214
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Entry
106607214 CDS
T04363
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106607214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sasa04090
]
106607214
04091 Lectins [BR:
sasa04091
]
106607214
CD molecules [BR:
sasa04090
]
Proteins
106607214
Lectins [BR:
sasa04091
]
I-type lectins (Siglecs)
106607214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ICAM_N
ig
C2-set_2
C1-set
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
106607214
NCBI-ProteinID:
XP_014059416
UniProt:
A0A1S3S4X9
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All DBs
Position
ssa06:complement(32014111..32021251)
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AA seq
694 aa
AA seq
DB search
MCDIIFSRIFLGFPVLLLWMAGGPTHASFPLELNPPRVVMRYGDSVSVNCSTSYTDHEGM
GWEATFGGTGFEQDVSIVTWTVDNLTDWTIEPICYMTLIDGKQPSKVLPVILYKTPDSVS
ISVLRHSGPMVEGTEYQLQCDIQNMAPQQNLVVKWYKGNEPLDNVTYSDVSKTPVDVSDT
LMISPSRHDDGAQYRCRAELDLGPEGPQPHPTVTSEPLSITVHYAPEFLPGNDTVEVSAG
SDVSLDCSAEGNPPPELRWTNNTAEGNANEATVGRLRTLYISRVTANATYNCTVTNGLGS
ITKQIHVLVDVPPQQHPTMFSTAPSTPGTMTTLPATAKPKVVTFPLELNPPRVVVRYGDS
VSVNCSTSSTDHEGMGWEATFGGTGFEQDVNIVTWTVDNLTDWTIEPICYMTLIDDEQPS
KVLPVILYKTPDRVSISVLRHPGPMLEGTEYQLQCDIQNMAPQQNLVVKWYKGNEPLDKL
TYSNVSKTPVDVSPTLMISPSRHDDGAQYRCRAELDLGPEGPQPHPTVTSEPLSITVHYK
PLINASRLPVRIPVFRGYPEELVCEAEGHPQPRIQWVYDPSKPVSVAGGNLTVFEEGFYN
CTATNDVGTSFIVVEVVLNEDYLPLIAGFVAFMVVVILVIFVFIYSIYYKNNKMGRYSLK
KAKLSSTPNGNVAQNGGRDTPLPMTQLSQPNIYV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatataatatttagtcggatttttcttgggtttcccgtacttctcctctggatg
gcaggtggtcctacacatgcctcctttcctcttgagctcaaccctcccagagtggtgatg
agatatggagactcagtctcagttaactgcagcacatcatacacagaccatgaggggatg
ggctgggaggccacattcggaggtacaggttttgaacaagatgtcagcattgtcacctgg
actgtggataaccttactgattggacaatagaacctatatgctacatgactctcattgac
ggcaaacaaccctcaaaagtacttccagtcattctctacaagactccagacagcgtctcc
atctctgttctgagacactctggtcccatggtggaggggacagagtaccagctgcagtgt
gacatccagaacatggctcctcaacagaacctggttgtgaagtggtacaaagggaatgaa
cccttagataatgtaacttacagtgacgtcagtaagacaccagtggatgtgtctgatact
ctgatgatcagccccagtagacatgatgatggagctcagtatagatgtagagcagaactg
gacctgggaccagagggaccacaaccccatcctacagtaacatcagaacctctcagcatt
actgtgcactatgctcctgagttccttccagggaatgacacagtggaggtgagtgcaggc
agtgatgtgtctctggactgcagtgctgaggggaaccctcctcctgagctgaggtggacc
aacaacactgcagagggaaatgccaatgaggccactgtggggcgcctgcgtactctctat
atctccagagtaacagctaatgcaacttacaactgcacagtcacaaatggactgggctcc
atcaccaagcagatacatgtcctagtagatgtacctccacaacaacacccaacgatgttc
tccacagcaccctcaactccaggaactatgaccaccctcccagcaacagccaagccaaaa
gtagttacctttcctcttgagctcaaccctcccagagtggtggtgagatatggagactca
gtctcagttaactgcagcacatcatccacagaccatgaggggatgggctgggaggccaca
ttcggaggtacaggttttgaacaagatgtcaacattgtcacctggactgtggataacctt
actgattggacaatagaacctatatgctacatgactctcattgacgacgaacaaccctca
aaagtacttccagtcattctctacaagactccagacagagtctccatctctgttctgaga
caccctggtcccatgttggaggggacagagtaccagctgcagtgtgacatccagaacatg
gctcctcaacagaacctggttgtgaagtggtacaaagggaatgaacccttagataaatta
acttacagtaacgtcagtaagacaccagtggatgtgtcacctactctgatgatcagcccc
agtagacatgatgatggagctcagtatagatgtagagcagaactggacctgggaccagag
ggaccacaaccccatcctacagtaacatcagaacctctcagcattactgtgcactataag
ccacttatcaatgcatctcgactgccagtgaggatacctgtgttcaggggctatcctgag
gagttagtgtgtgaggctgagggtcacccacagcccaggatacagtgggtctatgaccca
tcgaagcctgtcagtgtggcgggaggcaacctgactgtctttgaggaagggttctacaac
tgcaccgccaccaacgatgtggggacgagcttcattgtggtagaggtggttttaaatgag
gactacctgcccctcatagcgggcttcgtggccttcatggtcgtggtcatcttggtcatc
ttcgtcttcatctactccatctactacaagaacaacaagatgggccgctacagcctgaag
aaggccaagctcagcagcacgcccaatggcaacgtggcgcagaacggcggccgggacact
ccgctcccgatgactcaactgtctcagccaaacatctacgtctag
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integrated database retrieval system
