Salmo salar (Atlantic salmon): 106611703
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Entry
106611703 CDS
T04363
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04210
Apoptosis
sasa04218
Cellular senescence
sasa04620
Toll-like receptor signaling pathway
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
sasa04623
Cytosolic DNA-sensing pathway
sasa04625
C-type lectin receptor signaling pathway
sasa04920
Adipocytokine signaling pathway
sasa05132
Salmonella infection
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106611703
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106611703
04218 Cellular senescence
106611703
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106611703
04621 NOD-like receptor signaling pathway
106611703
04622 RIG-I-like receptor signaling pathway
106611703
04623 Cytosolic DNA-sensing pathway
106611703
04625 C-type lectin receptor signaling pathway
106611703
09152 Endocrine system
04920 Adipocytokine signaling pathway
106611703
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106611703
09171 Infectious disease: bacterial
05132 Salmonella infection
106611703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106611703
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106611703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
106611703
NCBI-ProteinID:
XP_014067665
UniProt:
A0A1S3STJ7
LinkDB
All DBs
Position
ssa09:65482780..65505283
Genome browser
AA seq
921 aa
AA seq
DB search
MAEEEPYLPHQPYNFDIDPLWDPLNFSPMSHSNSLRTVTADGPYLQIIEQPKQRGFRFRY
GCEGPSHGGLPGASSEKNRKSYPNIKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCD
KGICIADLQPKDSSISFPNLGILHVTKKNVSKTLEDRMSEAYRMGYNCGIVIHPEMDAFQ
GEFRIPRELTDHQRNLISSAASYQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPI
FDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGD
FSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEV
QRKRQKTLPNFQDYSGHGGAGGLYRGPGGGGPATGGGGGFFQGYSTYSNYGTSYSSGFSP
GMSGGGAGIKHAPQGRAEDSGDDSDMDDDPASGAVVGVRAKSEDASAGETSEERGAGVEL
GPGDRTGECVLEARLVDVAERQAEALFQYAVTGDVSYLLAPQRQLMTAQDENGDTGLHLG
VIHSQTDAVRSLAQVLSALPGEEVLNMRNNLYQTPLHLAVITQQKAAAEALLLAGADVTL
SDRHGNTALHLAAQQEEGGMVGFLLRHREIVELVDLPNAAGLCSLHLAVLANSLSSLRDL
LVSGGSVEVQERSCGRTALHLATEQDNISLAGCLLLEGNANVDCCTYNGSSPLHTATGRG
SVKLTALLMAAGADPHKENFEPLFFREHDCCVDEEEEDEGYIPGTTPLNMAATPEVLEIL
NGKEYKPETDVFVPPQGDMQSLGSDTKRALCQALECPEGGWESLAHILGLGILNSAFRLS
SSPASTLLDSYEVSGGKVKDLLEGLRTVGNCSALTVLEGALCEAEQAPQSTTKLLERVCD
LKLDGWEDSGVCDSGVELSTA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggagccttacctacctcaccaaccgtacaactttgacatagatccacta
tgggatcctctgaatttctctcccatgtcacactccaactcactccggacagttacagca
gatggaccctacctccaaatcattgaacagcctaaacagcggggcttcaggtttcgttat
ggctgtgagggaccctctcatggcgggctaccaggggcctctagtgagaagaacagaaag
tcctatcccaatatcaagatctgtaactaccaggggttggcacgtgtggtggtacagctg
gtgaccaactctaaagatgcccacctccatgcccacagtctggtgggcaagcagtgtgac
aagggcatctgcatcgcagacctacagcccaaagactccagcatcagtttccccaacttg
ggcatcctccatgtgaccaagaagaatgtgagtaagacactggaggaccgtatgtctgag
gcttacagaatgggctacaactgtggtatcgtcatccaccccgagatggacgccttccag
ggagagttccgcatcccccgagagctcactgatcaccagagaaacctgatcagcagcgca
gcgtcctaccaggctaaagagatggacctgagcgtggtgcgcctcatgttcacagccttc
ctcccagacagtgacgggggcttctcccgtagactggaccccgtcatatcagaccccatc
ttcgacagcaaagctccaaatgcgtctaacctgaagatagtgcggatggatcgaacagct
ggctgtgtgactggaggagaggaggtctacctgctctgtgacaaggttcagaaagatgac
atccaggtgcgcttctatgaggatgacgagacagggctgacatgggaggcctttggagac
ttctcccccaccgatgtccaccgacagtttgccattgttttcaagacccccaaatacaga
gacctgaacctccagaaacccacctcggtgtttgtgcagctgaagcgtaaatcggacaat
gagacgagcgagcccaagcccttcacctaccacccgcagatcatagataaggaagaggtt
cagaggaagagacagaagaccctgcctaacttccaggactacagcggccacggtggcgca
gggggcctgtaccgtggaccagggggggggggtcccgctacagggggaggaggaggtttc
ttccagggctattccacctacagtaattacggcaccagctacagctctggcttttcccct
ggcatgagtggtggcggggcgggaattaaacatgctccacaaggcagagcggaggacagt
ggtgatgacagcgacatggatgatgacccggcctcaggggcagtggtgggggtccgagcc
aagtcagaggatgcctctgctggggagacgagtgaggagagaggggccggtgtggagcta
ggaccaggggacaggactggagagtgtgtgctggaggccaggctggtggatgttgctgag
aggcaggctgaagccctcttccagtacgccgtcactggtgacgtcagctacctgctggct
ccacagcgccagctcatgactgctcaggacgagaacggtgacactggtctccatctgggg
gtgatccacagccagacagacgcagtcaggagtctagcccaggtcctctctgccctgcct
ggagaggaggtcctcaacatgaggaacaacctctaccagactcctttgcacctagcggta
ataacacagcagaaggcggcagctgaggccctcttattggctggggctgatgtcactctg
tctgatcgccacggaaacacagctcttcacctggccgcccagcaggaggagggaggtatg
gtgggatttctactgagacacagagagatagtggaactagtggacctccccaacgcagca
ggactgtgctccctccacctggctgtgctggccaacagcctgtcttccctcagggacctc
ctagtgagcgggggcagtgtggaggtccaggagaggagctgcggccgcacggcgctccat
ctggccactgagcaggacaacatctccctggcaggctgcctgctactggaggggaatgct
aatgtggactgctgcacctacaacggttccagccctctccatacagccacagggcggggc
tctgtcaagctgaccgctctcctcatggctgcaggtgccgatcctcacaaagaaaacttt
gagcccctgttcttcagagagcatgactgctgtgtggatgaggaagaggaggacgaaggc
tacatcccagggacaactcctctcaacatggctgccactcctgaggtgttggaaatcctg
aatggaaaagagtacaagccagagaccgacgtcttcgtcccccctcaaggtgacatgcag
agcctgggctcagacacaaagcgggcactatgccaggccctggagtgcccggagggtggc
tgggaaagcctggcacacatactgggcctgggcatcctcaacagcgccttcagactcagc
tcctcccccgcaagcacgctgctggacagctacgaggtgtctggaggaaaggtcaaggac
cttttggagggactcaggactgtagggaactgctctgctttgacagtacttgagggggca
ctgtgtgaagcagaacaggctccccaaagcaccacaaaactcctagaacgtgtgtgtgat
ctgaagctggacggatgggaggacagcggagtgtgtgacagtggggtggagctctccaca
gcgtga
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