Streptomyces atratus: C5746_30560
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Entry
C5746_30560 CDS
T07374
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sata
Streptomyces atratus
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sata03009
]
C5746_30560 (rimO)
Enzymes [BR:
sata01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C5746_30560 (rimO)
Ribosome biogenesis [BR:
sata03009
]
Prokaryotic type
ribosomal protein modification factors
C5746_30560 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AXE80587
UniProt:
A0A2Z5JJL9
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All DBs
Position
6680268..6681743
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AA seq
491 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAAVALPGHAQEAAPAPAPEDLPDGVAPVSGPRAP
LRRRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVML
VSENNTSYGKDLGDIRLLETLLPELADVEGIERIRVSYLQPAEMRPGLIDVLTSTPKVAP
YFDLSFQHSAPGVLRAMRRFGDTDRFLELLDTIRSKAPQAGARSNFIVGFPGETEADLAE
LERFLTGARLDAIGVFGYSDEEGTEAVGYENKLDADVIAERLAHISQLAEELTSQRAEER
LGESLQVLVESVDEEDGAVGRAAHQAPETDGQVLFTAREGLVPGRMVEAKVVGTEGVDLV
AECSELVEAAR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggagctcgtcgaggatgcctcc
gacgcggatgtcgccgtcgtcaacacctgtggattcgtcgaggccgccaagaaggactcc
gtcgatgccctgctcgaagccaatgatctgaaggaccacggcaggacccaggccgtggtc
gccgtcggctgcatggccgagcgctacgggaaggacctcgccgaggccctgcccgaggcg
gatggcgtcctcggattcgacgactacgccgacatctccgaccgccttcagaccatcctc
aacggtggcatccacgcttcgcacaccccgcgcgaccgtcgcaagctcctgccgatcagc
ccggccgagcggcaggacgccgccgtggccctgccggggcacgcacaggaggccgcaccg
gcccccgcccccgaggacctcccggacggagtcgctccggtctccgggccgcgggcgccc
ctgcgccgccggctgggcaccagccccgtcgcctcggtgaagctcgcctccggctgcgac
cgccgctgctccttctgcgccatcccttccttccgcggttccttcatctcgcgccgtccg
tcggacgtgctgggggagacccgctggctggccgagcagggcgtgaaggaggtcatgctg
gtctccgagaacaacacctcgtacggcaaggacctcggcgacatccggctgctcgagacg
ctgctgccggagctcgccgacgtcgaggggatcgagcggatccgggtcagctatcttcag
ccggcggagatgcggccgggcctcatcgacgtactgacctcgaccccgaaggtcgccccg
tatttcgacctgtccttccagcactcggcccccggcgtgctgcgggcgatgcgccgcttc
ggtgacaccgatcgcttcctggagctcctggacaccatccgtagcaaggcgccacaggcc
ggtgcccgctccaacttcatcgtgggcttcccgggcgagaccgaggccgacctggcggag
ctggaacgcttcctcaccggcgccaggctcgacgccatcggcgtcttcggttactccgac
gaagagggcaccgaggcggtcggttacgagaacaagctggacgccgacgtcatcgcggag
cggctcgcgcacatctcgcagctggccgaggaactgacctcgcagcgcgccgaggagcgc
ctgggcgagtccctgcaggtgctggtcgagtccgtggacgaagaggacggtgcggtgggg
cgcgcggcacaccaggcccccgaaacggacggccaggtgcttttcaccgcacgcgagggc
ctcgtgcccggccgtatggtcgaggcaaaggttgtcggcaccgaaggagtggacctggtg
gccgagtgttccgagctcgtggaggcggccagatga
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