Shewanella avicenniae: JYB87_02620
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Entry
JYB87_02620 CDS
T07845
Symbol
nifH
Name
(GenBank) nitrogenase iron protein
KO
K02588
nitrogenase iron protein NifH
Organism
savi
Shewanella avicenniae
Pathway
savi00625
Chloroalkane and chloroalkene degradation
savi00910
Nitrogen metabolism
savi01100
Metabolic pathways
savi01120
Microbial metabolism in diverse environments
Module
savi_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
JYB87_02620 (nifH)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
JYB87_02620 (nifH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_NifH
CbiA
AAA_31
ParA
ArsA_ATPase
MeaB
MipZ
DUF87
SRP54
AAA_22
AAA_24
nSTAND3
RNA_helicase
AAA_25
AAA_16
CLP1_P
ATP_bind_1
AAA_10
CBP_BcsQ
HerA_C
NACHT
AAA_30
FtsK_SpoIIIE
Thymidylate_kin
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QSX34159
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Position
617872..618747
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AA seq
291 aa
AA seq
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MAIRQCAIYGKGGIGKSTTTQNLVAALAEAGKKVMIIGCDPKADSTRLILHSKAQNTIME
TAAEAGSVEDIELEDVLKIGYGDVRCVESGGPEPGVGCAGRGVITAINFLEEEGAYEEDL
DFVFYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNISKGICKYAASGSVRL
AGLICNSRNTDREDELIMALAAKIGTQMIHFVPRDNIVQRAEIRRMTVIEYDPTCKQADE
YRALAQKIINNKMFVVPEPCTMDELEDLLMEFGIMEVEDQTIIGKTAAELA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcgtcaatgtgcgatttacggcaaagggggtattggtaaatctaccactact
cagaacctagtagcggcactggccgaagcaggtaagaaagtgatgatcatcggctgtgac
ccaaaagctgactcaacccgtttgatcctgcactcaaaagcgcaaaacaccatcatggaa
actgcggctgaagccggttcagtagaagatatcgaactggaagatgtattgaaaatcggt
tacggcgatgtacgttgcgttgagtcaggtggtccagagccaggtgtgggttgtgcaggc
cgtggtgttatcactgcgatcaacttcttggaagaagaaggcgcttatgaagaagacctc
gacttcgtattctacgacgtattgggtgacgtggtgtgtggtggttttgcgatgccaatt
cgtgaaaacaaagctcaagaaatctacatcgtttgctctggcgaaatgatggcgatgtac
gcggcaaacaacatctctaaaggtatttgtaagtatgcggcatcaggcagcgtacgtttg
gcaggccttatctgtaactcacgtaacactgaccgtgaagatgagttgatcatggcgctg
gcagccaaaatcggcacccaaatgattcacttcgtaccgcgtgacaacatcgtacaacgc
gctgaaatccgtcgtatgacagttatcgaatacgatccaacctgtaagcaagctgatgaa
tatcgtgcattggcacagaaaatcatcaacaacaaaatgtttgtggtaccagagccttgc
accatggatgagctggaagacctgttaatggaattcggcatcatggaagtggaagaccaa
acaatcatcggcaaaaccgcggctgagctggcttaa
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