Shewanella avicenniae: JYB87_04540
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Entry
JYB87_04540 CDS
T07845
Name
(GenBank) EAL domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
savi
Shewanella avicenniae
Brite
Enzymes [BR:
savi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
JYB87_04540
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE8
CHASE5
GAPES3
HAMP
Motif
Other DBs
NCBI-ProteinID:
QSX34523
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Position
complement(1049777..1051813)
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AA seq
678 aa
AA seq
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MRKTRFKSLTFKQTVLVVMTALFFAFAIFIVEVLMLVKVQTETLENAQQELLDSVEHPLE
SAVWAFDRALAEQTLEGILNVDYIASAKVLLDNSEKFVNLDNRVDETADIYLAIGSRLFG
PLKQVSRDLYNPPESSINKKPQHIGTLYIDYDTRDLAKALFSQLQMSFFATLARALFITL
VLSFIFHRFLTQPIAKIGEAIDRIDPESPDNHLLPTFSNHEDDELGIVTTKLNQILMEFT
QTQNKLRKLATRDSLTGLPNRTLLLETIAVAIQRAKASNQQLGVLFIDLDRFKNVNDSLG
HALGDQFLIRVALMLRRFVGNRGTVARLGGDEFVILHDELRSANEAAEFVDKLIRQLQTP
IKLDDHSLHPAASVGISLFPDDGQTPEDLIRHADMAMYNAKAIGSNQWSFFKQQMTEKAA
VRLRTEASLHDAIINNEFLLHFQPKLDIHTGELVGCEALIRWQHEGRLISPMTFIPVAEE
TGIIVPIGRWVLEQTCKSLSKWQKLYNTSTTVACNVSSKQFADASLIPDIKRMAMRYQID
PSLIEIEITETSLMDDIDLAINKLKQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTLKID
RAFVSDLPHDNAIASTILTLGKQLHLNIVAEGIENEQQERWLKSNGCVIGQGFYYSKPLP
IEEFEQLYLAPRSRQVQS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacgcgttttaaatcactcacattcaaacaaacagtactcgtggtaatgaca
gcgcttttttttgcctttgccatctttatcgttgaagtactgatgctggtaaaagtacaa
actgagacgttggaaaatgcgcagcaggaattgttagattcggttgaacacccgttagag
agcgccgtatgggcctttgatagagcgttggcagaacaaacgctcgaaggcattctaaat
gtagactatatcgccagtgctaaagtgctgttggataacagcgaaaaattcgtcaattta
gataatcgtgtcgatgaaaccgcagacatctacctagcaattggcagcaggctgttcggg
ccgctgaaacaggtatcgcgcgatctgtataatccacccgagtcgtccatcaataaaaag
ccgcaacatattggtacgctctatattgactacgatacacgggacttggccaaagccctg
ttcagccagctacagatgagctttttcgccacattggcgcgcgcactgtttatcacctta
gtgttgtcgtttattttccatcgtttcttaacccagccgattgccaaaattggcgaagcc
attgatcgcattgacccagagtcacccgacaatcacctattgcccacgtttagcaatcat
gaagatgatgaacttggcatagtcaccaccaagctgaatcaaattttgatggagtttacc
caaacccaaaacaaactgcgcaaactggctacccgagacagcttaactggcctgcccaac
cgcaccttactgttagaaaccattgccgtagccattcaacgggccaaagccagtaatcaa
caattgggtgtattgtttatcgatttagatcgcttcaaaaacgtgaacgattcacttggc
catgcgcttggcgaccagtttctgatccgcgtagcgttaatgctgcgtcgttttgttggc
aaccgcggtacagtcgcgcgccttggtggtgatgaatttgtaattttgcatgatgaacta
cgctctgcgaatgaagccgcagagtttgtcgataaactcatcagacagctacaaacgccc
attaagcttgatgaccattcgctgcatccagccgcatctgtggggatttcgttatttccc
gatgatggccaaacccctgaagatcttattcgccatgccgatatggcgatgtataacgcc
aaggctatcggttcaaatcagtggtctttctttaaacaacagatgactgaaaaagccgct
gtgcgcctcagaaccgaagcctcgctgcacgatgccatcatcaacaacgagtttttactg
cacttccaacctaaactagatattcacactggcgaactggtgggctgtgaagcactgatc
cgctggcagcatgaaggtcgcttaatcagtccaatgacctttattcccgttgctgaagaa
actggcattattgtgccgattggccgttgggtattggagcaaacttgtaaatcattgagc
aaatggcagaaactgtacaacaccagcaccacggtggcatgtaacgtgtcctcgaaacag
tttgcggatgcgagcctcatccctgatatcaaacggatggccatgcgctatcaaatcgac
ccgagtttgattgaaatcgagattaccgagacctcgctgatggacgatatcgatttagcc
atcaacaagctgaagcagttaaagtcagcaggatttgggattgcggttgatgattttggc
acgggctattcgtcactgtcttatctgcgccatctgccgatcactacgctgaaaatcgac
cgagcatttgtatctgatttaccccacgacaatgcaatagcgtcgacgattctgaccctt
ggcaaacaactgcatctcaatattgtggcggaagggattgagaacgaacagcaagagcgc
tggttaaagagtaatggttgtgtgattggccaaggtttttactacagtaagccgttgcca
atcgaagagttcgaacaactctatttggcaccaagaagccgccaagttcagtcgtaa
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