Shewanella avicenniae: JYB87_05825
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Entry
JYB87_05825 CDS
T07845
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
savi
Shewanella avicenniae
Pathway
savi00730
Thiamine metabolism
savi01100
Metabolic pathways
savi01240
Biosynthesis of cofactors
savi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYB87_05825 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JYB87_05825 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_05825 (thiI)
Enzymes [BR:
savi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JYB87_05825 (thiI)
Transfer RNA biogenesis [BR:
savi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JYB87_05825 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Y_phosphatase3
Motif
Other DBs
NCBI-ProteinID:
QSX34753
LinkDB
All DBs
Position
1315561..1317015
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLESNIRNVLKKVDEEAAVLRQWDRIMVHVPTGKPE
LVDVFAERLACIPGISTISQVNEYSFETVHDIYEHALKAFGASLAGKTFCVRVKRTGQHE
FNSIDVEKYVGGGLNQHTDAAGVKLKNPDTTVNLEINKDKLYLVERKIPGLGGFPIATQE
DVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAHHLWKRYGESHKVK
FVTVPFEPVVAEILERIDNGMMGVILKRMMMRAATRVAERMGIQALVTGESLGQVSSQTL
TNLNVIDRCTDLLILRPLITMDKQDIINESRIIGTEDFAKSMPEYCGVISQRPTVKAVLA
KIEEQETKFSEDLLDRVMAAAEVIDIREIAETMDTKVAETETVSTVAEQQIVIDIRSPEE
EERKPLAVSGVEVKHIPFFKLATAFADLDKSKTYLLYCERGVMSKLQALYLLEQGHSNVK
VFRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgttaagctgtaccccgaaattatgatgaagagcaagccggtgagaatg
cgtttcaccaagatgctcgaatccaatatccgtaatgttctcaagaaagtagatgaagaa
gccgctgtgttacgccagtgggatcgcatcatggtgcatgtccccacaggtaaacctgaa
ttggtggatgtgtttgctgagcgtctcgcctgtattccgggcatctcgacgattagtcag
gttaacgagtacagctttgaaacggtacacgacatctacgagcatgcattgaaagcgttt
ggtgcatcgttagcgggcaaaactttctgtgttcgggttaagcgtaccggtcaacacgag
ttcaactcgattgatgtggaaaagtatgtcggtggtggtttaaaccaacatactgatgct
gctggtgttaagttgaagaaccctgacaccacagtgaatctcgaaatcaacaaagataag
ctttacttggttgagcgaaaaatcccaggcttaggtgggttcccgatcgcgacgcaagaa
gatgtattgtcgctgatttccggtggctttgactcaggcgtatccagtttccaatttatc
aaaaagggcgctcgcactcactattgcttctttaatcttggtggtgcgcagcacgagatt
ggggtgaagcaagtggctcatcatttgtggaagcgctacggcgaatcccacaaggtgaag
tttgttactgtgccatttgagcctgtggtggctgagatcttagaacgtatcgacaacggc
atgatgggcgtgatcctcaagcgaatgatgatgcgcgctgcgactcgcgttgctgaacgt
atgggcattcaagctttggtcactggtgaaagtttgggacaagtgtccagccaaacctta
accaacctcaatgtgattgatcgttgtaccgacttgctgatcttgcgtccgctgatcacc
atggacaagcaagacattatcaacgaaagccgcattatcggtactgaagattttgccaaa
tccatgccggagtattgtggggtgatttcgcaacgcccaaccgtaaaagcggtgttagca
aagattgaagaacaagaaactaagttctctgaagatttgttagaccgagtgatggctgcg
gcagaagtaattgatattcgtgagattgctgagactatggatacgaaagtagcggaaact
gaaaccgtcagtacagttgctgaacagcagatcgtcatcgacattcgttcgcctgaagag
gaagagcgtaaaccgttggctgtcagtggcgttgaagtaaaacacattccgttcttcaaa
ctcgccaccgcgtttgccgatttagataagagcaaaacctatctgctctattgcgaacgt
ggcgtgatgagtaaactgcaagcgctgtacctgctcgagcagggacatagcaacgtgaaa
gtctttcgcccttaa
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