Shewanella avicenniae: JYB87_06250
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Entry
JYB87_06250 CDS
T07845
Name
(GenBank) GMC family oxidoreductase
KO
K06151
gluconate 2-dehydrogenase alpha chain [EC:
1.1.99.3
]
Organism
savi
Shewanella avicenniae
Pathway
savi00030
Pentose phosphate pathway
savi01100
Metabolic pathways
savi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
JYB87_06250
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.3 gluconate 2-dehydrogenase (acceptor)
JYB87_06250
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
QSX34821
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Position
1415604..1417376
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AA seq
590 aa
AA seq
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MARQEKPVDVVLVGLGWTNSIMGMELAQEGLNVLALERGEDRDTVPDFAYPKMADELTYG
VRYKLMAKPAKSTITVRHSLTETALPYRHLGSFLPGDGVGGAGTHWNGHTWRPMPEELRL
RSYVEETFGKDIIPADMTIQDFGVSYDELEPHFDFFDKVMGVSGKAGNVNGEIHEGGNPF
EGRRSSEYPLPPLKRTFNDELFTNVAKEHGLHPFPLPSSNASEAYTNPYGMQLGPCNFCG
FCERYGCLNFSKASPQTCILGALKQHKNFSYRANSEVLKVELADDKKTAKGVTYIDKNGE
EVFQPAKIVIVGTFAYNNVRLLLLSGIGQPYDPVTNTGTVGRNYAYQMMGGATLFFKDKF
FNPFIGAGSNATTVDDYAINQIDFAKEGFIGGSYLLAAQTNGQPIRSMPLPAGTPSWGAG
WKKATKDYYGHSMSISSHGSNMSYRDCYLSLDPNYTDDHGLPLLRLTFDWKDNDIRMTQF
MKGKVEALAKGLNPDHLNISFKDFGAKYDVRPYQTTHNVGGAIMGTNPKTSVLNRYQQSW
DVHNVFVLGSSSFPQNLQYNPTMLVGGLAYWTAKAIREQYLKQPGPLVQA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacaagagaaaccagtagacgtagtactcgtcggccttggttggaccaactcc
atcatgggcatggaactggcacaagaagggctcaatgtactggcattagaacgtggtgaa
gatcgcgatactgtgcccgattttgcctatccgaaaatggcagatgaactgacttacggc
gtgcgctataaattgatggccaagcctgcgaaaagcaccatcacagtgcgccacagttta
actgaaactgcattgccgtatcgtcatttgggttcatttttgccgggcgatggcgtgggc
ggtgcgggtacgcactggaatggtcacacctggcgaccaatgccagaagagctgcgttta
cgcagttacgtcgaagaaacctttggtaaagacattattcccgcagacatgaccattcaa
gattttggtgtgtcctatgatgaactggaaccgcactttgactttttcgacaaagtgatg
ggggtttcaggaaaagcgggtaacgtaaatggcgagatccacgaagggggcaaccctttt
gaaggtcgccgtagcagcgaatatccattaccaccgctgaaacgcactttcaacgatgag
ctgtttaccaatgtggctaaagagcatggtttgcatccattcccgctgccatcttcaaat
gcgtcagaagcctacaccaacccttacggtatgcagttaggcccatgtaacttttgtggt
ttctgcgaacgttatggctgcttaaacttttctaaagcatcgccgcaaacctgtattttg
ggtgcgctgaaacagcacaaaaacttctcctatcgtgccaacagtgaagtgctgaaggtc
gaactggcagatgataagaaaaccgccaaaggtgtgacttacattgataaaaatggcgaa
gaggtgtttcaaccggccaagattgtgattgtgggtacctttgcctacaacaacgtgcgc
ctgttgctactatccggcatcggccaaccttacgacccagtgactaacacaggtaccgtg
ggccgcaactacgcgtatcaaatgatgggcggcgcgaccttgttctttaaagataaattc
tttaacccctttattggcgctggcagtaacgctaccacagtggatgactacgccatcaac
caaattgacttcgccaaagagggctttattggcggttcctatctgttggcggcacaaacc
aacggtcagcctatccgcagtatgccgttgcctgccggcacgcctagctggggtgcgggt
tggaaaaaagccaccaaagattactacggccactccatgagcatcagttctcacggctca
aacatgtcttatcgtgactgctatctgagtcttgatcctaattacactgacgatcatggt
ctgccgctgctgcgtttgaccttcgactggaaagataacgatattcgcatgacccagttt
atgaagggcaaagttgaagccttggctaaagggttaaatcctgatcacctgaatatctca
ttcaaagactttggcgcgaaatacgatgtgcggccatatcaaacaacccacaacgtgggt
ggtgcgatcatgggcactaatcctaaaaccagcgtgctcaaccgttatcagcaaagttgg
gatgttcacaacgtgtttgtgttgggctcaagctcgttcccacaaaacctacagtacaac
ccaaccatgctcgttgggggattagcgtattggactgccaaagcaatccgcgaacaatac
ctgaaacaacccggtccgttggtacaggcataa
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