Shewanella avicenniae: JYB87_07060
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Entry
JYB87_07060 CDS
T07845
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_07060 (mnmC)
Enzymes [BR:
savi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
JYB87_07060 (mnmC)
Transfer RNA biogenesis [BR:
savi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JYB87_07060 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
Lycopene_cycl
NAD_binding_8
FAD_binding_3
Pyr_redox_2
F420_oxidored
Ldh_1_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QSX34971
LinkDB
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Position
complement(1602532..1604442)
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AA seq
636 aa
AA seq
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MQTTEHPRFSATIAYCGITAIKTLFDEISAETASIHGYRLLFLSANDTAPSALQQQLLQQ
LAQLASDPSTDELKLAISQMSADALITGQRFIHKQLCIDIYPQLSSEHLKQRLIPFASIG
HWDLSHTDCNTFATATIWQMALLSITAATVKLAANVSAALQQQIVTAGFQLNKSNAGSGS
EIPLMTCASAPNDSEIVQQEKSALANKALQTRMPFPVFVVPSTLANDPVAIIGAGVAGSQ
LALSLAEKGVASQVFCADAEPGVAASGNRQGALYPLLTPEDSVQNRFFVQAFEYSRQRIA
ALARSQPELAHAFCGVLQTGFDDRSRQRLAKIANGQSWSNAVLQWKSSADASAIAGLPIH
EEAIYYPNGGWVCPKQLSQLALLQAQALGFCRLTTKCHIDKIESTPAGWMLTSGEYQFGP
FKRLVLANGAGVTELPQLQALPISPFRGQVSEIDTNPTLSQLSTVICAKGYLTPAWQQQH
CLGATYVKGDRNCDIRANEQQDNLDKLKLSYQAHDWVEQIDKGERARVGIRMVTRDHLPM
VGAAPDVTAIFAKADSLGPTPESIAEWEAQPAPVLTGLYLLAGLGSRGICSGPLAAEMLA
CELTQQPMPVSLEVQQALSPNRMWLRKLLKGRAISL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacaactgaacacccgcgattttctgccactattgcctattgcggtatcaccgcg
ataaaaacgctatttgatgagattagcgccgaaacagcaagtattcacggctatcgtctg
ctgtttttatcggcaaacgatacggcgccatcagccttgcagcaacagctactgcagcag
cttgcgcaattagccagcgatccaagcaccgacgagctgaaacttgccatctcacagatg
agtgccgatgcccttatcactgggcagcgctttattcataaacaactgtgtattgatatc
tacccgcagctcagcagcgaacacctcaaacagcgactgatcccgtttgcctcaattggg
cattgggatttatcccacaccgattgcaacaccttcgcaaccgccaccatttggcaaatg
gccttactcagtataaccgctgccacggtaaagctggcagcaaacgtcagtgccgcatta
caacagcaaatcgtgacagcgggatttcaactaaacaaaagtaatgcgggctctggtagt
gaaatacctttgatgacgtgtgcttcagcaccgaatgacagcgaaatcgtgcagcaagaa
aaatcagccttagcaaacaaggcgctgcagacgaggatgccgtttccggtgtttgtggtt
ccgtcgactttagccaatgaccccgttgccatcatcggtgctggcgttgccggtagccaa
cttgcgctatcgttagcagaaaaaggcgttgccagtcaggtattttgtgctgatgccgaa
cctggggttgcggcatctggtaatcgccaaggtgcgctttatccgctactaacgccagaa
gactcagtgcaaaaccgctttttcgtgcaggcattcgaatatagtcgccagcgcatagcc
gccctcgcccgcagccagcctgagcttgcacatgcgttttgtggtgtgttgcaaaccggc
tttgatgaccgtagtcgccaacgactggcaaaaattgcgaatgggcaaagctggtcaaac
gcggtactgcagtggaaatcttccgccgacgcaagtgcgattgccgggttacccattcat
gaagaagctatctattaccccaatggtggttgggtatgccctaaacaactgagccaactt
gcgctgctgcaggcgcaggcattaggcttttgccgcctcaccactaaatgccatatcgat
aagattgaatcgacaccagcggggtggatgttaaccagtggcgagtatcaattcggcccg
tttaagcgactggtgttagccaacggtgcgggcgtgaccgaactgccacaattgcaggcg
ttaccgatttcgccatttcgcggccaagtttcagaaattgacactaatcccacgctatcg
caacttagcactgtgatatgcgccaaaggctacctgacgccagcgtggcaacagcagcat
tgccttggcgcgacctatgtgaaaggcgatcgaaactgcgatattcgcgccaacgagcag
caagataacctcgacaaactcaaactcagctatcaagcgcatgattgggttgaacagatt
gacaagggggaacgtgcgcgcgtgggcatcaggatggtaactcgcgatcatttacctatg
gtcggggcggcgcctgacgtaaccgccatttttgccaaagccgacagtctcggccccacg
ccggaaagcatcgctgagtgggaagcacaacctgcgccggttttgaccgggctttatctg
ctggctggacttggctctcgcggcatctgcagtggcccattggcagcggagatgttggcc
tgtgaactaacgcagcaacctatgccagtgagtcttgaagtgcaacaagcattgagtccg
aaccgtatgtggctgcgcaaactgctcaaaggccgtgccattagtctttga
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