Shewanella avicenniae: JYB87_11905
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Entry
JYB87_11905 CDS
T07845
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JYB87_11905 (ltrA)
Enzymes [BR:
savi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
JYB87_11905 (ltrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
Motif
Other DBs
NCBI-ProteinID:
QSX32471
LinkDB
All DBs
Position
complement(2705763..2707112)
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AA seq
449 aa
AA seq
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MPNLSIPTTSTDDYYQQRISQQPAFSSNLFQQLLEPENLHRAWRQVKANNGAAGIDGMTI
ESFPRWMQQGGWQQCKSQLERGEYQPSAVRRVEIDKSDGGKRKLGIPTVIDRVIQQAIAQ
ILTPLFDPHFSVNSFGFRPNRNAQQAVLQVRDIIKQKRKFAVDVDLSKFFDRVNHDLLMT
QLRSKVQDKRLLALIGKYLRAGVMVNDQFEASFEGVPQGGPLSPLLSNIMLDSLDKELES
RGHHFARYADDFIILVKSQRAGERVLKSITHYLGTKLKLIVNEHKSQVVKVGQSKFLGFT
FNRGKIQWHANTLHVFKQKIRRLTNRNWGVSMSYQLFKLRQYMQGWINYFGIANAYQGCV
DLDHWIRRRVRMCFWRQWRKPRTKVQNLLKRGVRIQAAVACGLTSKGPWRSSKTPGIQQA
LSNEYLTNAGLYSLRDGWISVHYPSQITG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaacttgtcgatacccactacgtcgacagacgattactatcaacagcgtattagc
cagcaaccagccttcagcagcaatctatttcagcaactactcgaacctgagaatctacac
cgagcttggcgacaagtgaaagccaataatggcgcggcgggcattgatggcatgaccatc
gaatccttcccgcgctggatgcaacaaggcggctggcaacagtgtaaatctcagcttgag
cgaggagaatatcaaccctcagcggtcaggcgtgtagagatcgataaatccgatggcggt
aaacgcaaattggggatccctaccgtgattgatcgtgtgatacaacaagcaatcgctcaa
atactcacgccgttgtttgaccctcacttttcagtgaatagcttcggctttaggccgaac
agaaacgcccaacaggcggtactacaagtcagggatatcatcaaacagaaacgcaaattt
gccgttgatgttgatctgtccaagttctttgaccgcgtcaaccacgatctgttgatgact
cagttaaggagtaaggtgcaggataagcgtctgctggcgcttattggcaaatacctacga
gcgggcgtcatggtcaacgaccaatttgaagcaagcttcgaaggtgtacctcagggcggc
ccactctcaccattactatcaaatatcatgctggatagtttggataaagaactggaaagt
cgaggacatcacttcgcccgctacgctgatgactttatcatcttggtgaagtctcaacgg
gcgggagaacgtgttctcaagagtattactcattatcttggtacgaagctaaaactgatc
gttaacgagcataaaagccaagtggttaaggtaggccaaagcaaattccttggtttcacc
tttaaccgaggaaagatccaatggcatgccaacacgttgcatgttttcaaacaaaagata
cgacgactgacgaaccgcaattggggagtcagtatgagctatcaactgtttaaactgcgg
caatatatgcaaggttggatcaattactttggcatagccaacgcttatcaagggtgcgtc
gatttagaccactggatccgtcgccgagtgcgtatgtgcttctggcgtcagtggcgaaaa
ccacggactaaggtgcaaaacctactgaaacgaggtgtcaggatccaagcagccgttgct
tgtgggctcacaagtaaaggcccttggcgtagctcgaaaacgccaggcatacagcaagcg
ctgagtaacgaatatctgacgaacgcaggattgtattcactaagagatggatggatttct
gttcattatcctagccaaataacaggttag
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