Shewanella avicenniae: JYB87_13020
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Entry
JYB87_13020 CDS
T07845
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
savi
Shewanella avicenniae
Pathway
savi00052
Galactose metabolism
savi00511
Other glycan degradation
savi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
JYB87_13020
09103 Lipid metabolism
00600 Sphingolipid metabolism
JYB87_13020
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JYB87_13020
Enzymes [BR:
savi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
JYB87_13020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Mannosidase_ig
Big_14
Motif
Other DBs
NCBI-ProteinID:
QSX32667
LinkDB
All DBs
Position
complement(2932416..2935577)
Genome browser
AA seq
1053 aa
AA seq
DB search
MNQAIALPEKAEIADRPEWEDLSVFQVNTLPPHATFMRYDSPQKLVNDDYKTSPYFQSLN
GTWKFKWAKNPFTYTDNFYNTDFNDGEWDNIPVPSNWQMHGYDYPIYTNIDYPFEVNPPF
VPKEDNPTGHYRQAFYVDKAWQGKRVVLHFGAVKSAFYLWINGHQVGYSEGSKTPVEFDI
SQYLTAGKNVLAAKVIRFSDGSYLEDQDFWRLSGIERDVYLYATPQVFVSDFFAKTTLSD
DYKDGVLGLEIEANNSKPAPQSLTLTTEILDQNGKLVSSQQRSVMIAAGQKLTVKQSFNV
ANVKTWSAESPNLYQLRIKTDYQDGQPSDFIGTEIGFRRIELEDEQVLVNGQPILFKGVN
RHEHDERTGHVVSRESMLLDVQLMKQNNINAVRTSHYPNDPYFYHLADKYGLYIIDEANI
ETHGFTFEPDKTPANKPEFHDVHMNRIKRMVERDKNHPSIIFWSMGNEAGDGPNFKDAYH
WTKFRDNSRLAFYEKAENPRSGFSEYHTDAVGWMYASMEEIKRDFLGKDPFRPFIWAEYA
HAMGNSTGNLKELWDLVRSERQMQGGFIWDWVDQGLIKRDKEGNEFWAYGGDFEPSHVHN
DANFCLNGLVNPDRTPHPGLFEVKKIYQDVHFSQVSDGEFEVFNEQFFTSLKELSVNWTL
LKDGVVIKEGKLNLDVAPQEKHRFSLPNNIGKLDAGAEYFINFYVRTKSASLAVPKGHLI
AVEQLPLSANDNMQSNLLSDDHSSVDLQVVDMGGVLEILAKDARLSFDEQGFLTSYQLNG
QQLLSAPLKLNFWRAPTDNDFGNQLPIRAKSWRLATDNQVGKGVKIVRQSKKAVELAQLI
ELKEVNSTASVQYVIASTGVLSVNVQFKFRGDDSLSELPRIGLKFQMPSSYQAVKYYGRG
PFENYPDRKSASLVGLYHGEVNDLEFDYIRPQENGYRSDIRWLKLVDNAGTGFTVKGNHN
FGFSARNYPESELDPGDKKAQRHIHDVKSHDLVEVNVDYLQSGLGGDTSWGAKPLPQYQI
PPANYSFGFSLVPSSDEHDDAASYQKIGNYNYH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagcaattgcgcttcctgaaaaggctgagattgcagatagaccagagtgggaa
gatctcagcgtattccaagtgaataccttgcctcctcatgccacattcatgcgatatgat
tcacctcaaaagttagtaaatgacgactacaaaacatcgccttattttcaatctctaaat
ggaacatggaaatttaagtgggcaaaaaatccatttacctatacggacaatttttataac
accgactttaatgacggtgaatgggataacatcccggtaccgagtaattggcagatgcat
ggatacgactatccaatctataccaatattgattatccatttgaggtgaacccacccttt
gtgcctaaggaagacaatccgacagggcattaccgacaggctttctatgtcgataaagca
tggcagggtaaacgcgtagttttgcattttggtgcggttaaatcagcgttctatctatgg
ataaatggccatcaggttgggtacagcgaaggcagtaaaacacctgttgagtttgatatc
tcccaatacttaactgctggtaagaacgtgttggccgctaaggttatacgcttcagtgat
ggcagttacctcgaagatcaagatttttggcgcctcagtgggatcgaacgggacgtatat
ctatacgcgacacctcaagtttttgtgagcgacttttttgctaaaacgacgctatctgat
gactacaaagatggcgttctcgggttggaaatcgaggctaacaatagtaaaccagcgcct
caaagtctgaccttaacgacagagatattagatcaaaatggtaaattggttagttctcag
caacgaagcgtgatgatagctgcgggacaaaagctaacggtgaagcaaagttttaatgtc
gcgaacgttaaaacttggtctgctgagtcaccgaacctctatcagttacgaattaaaact
gattaccaagatggtcaaccgtcggattttattggtacagaaattggatttaggcgtatt
gaactcgaagatgaacaagtgctggtaaacggacaaccgattttatttaaaggggttaac
cgtcatgaacatgatgagcgcactggccacgtagtttcgcgtgaatcaatgttgttagac
gtgcagctgatgaagcagaacaatatcaatgcagttcgaacttcccattatccgaatgac
ccttatttctatcatctagctgataaatatggtctttatattatagatgaagccaacatc
gaaactcacggctttacttttgagcctgataaaaccccagcgaataaacctgaatttcat
gatgttcacatgaaccgcatcaaaagaatggtggagcgtgataaaaaccatccttcgatt
atcttttggtctatggggaatgaagcgggtgatggccctaattttaaggatgcttatcac
tggacgaagtttagagataactccagattggccttctatgaaaaggctgaaaatccgcgc
tcagggttcagcgaataccacaccgatgctgttggttggatgtatgcatcaatggaggaa
atcaaacgagattttctcggaaaagatccattcagaccctttatttgggcggaatatgcc
catgctatgggcaacagcactgggaacctgaaagagctgtgggatttggtcagatctgaa
cgccagatgcaaggcggctttatctgggattgggttgatcaaggacttattaagcgcgac
aaggaaggtaacgagttttgggcttatggtggtgattttgaaccctcacatgtccataac
gatgcaaatttttgtcttaatggattggtgaatccagatagaacaccacaccctggctta
tttgaagtaaaaaaaatctatcaagatgttcattttagccaagtatcagacggtgagttt
gaagtgttcaacgagcagttctttacctcacttaaagagctctctgtaaactggacattg
ctcaaagatggggtggttatcaaagagggcaaattaaacttagatgtcgcccctcaagaa
aaacaccgttttagcctgccgaacaatatcggtaagttggacgctggcgctgagtatttc
ataaacttttatgtgcgtactaaaagtgcttcgttagcggttccaaaaggccatttgatt
gctgtcgagcaattgccgttaagtgctaacgacaacatgcagtcaaatctattgagtgat
gatcatagctctgtcgatcttcaggttgtggacatggggggcgtgctagagatactcgcc
aaggacgctcggctgtcttttgatgagcagggattcttaacctcttaccaacttaatgga
cagcaattattaagtgcaccgcttaagctgaatttttggcgcgcaccaacagataatgat
tttggcaatcaattgcctattcgagctaaaagttggcgtcttgcgactgacaatcaagtt
ggcaagggagtcaaaatcgttcgtcagtcgaagaaggctgtggagttggcgcaattgata
gagttaaaagaggtgaattcaacggcatccgtccaatatgttatcgcatctaccggtgta
cttagtgtcaatgtccaattcaagttcagaggtgatgattcgctaagtgaactgcctcgc
attgggttgaaatttcagatgccttctagctatcaggcggtcaaatattatggtcgcggg
ccgtttgaaaactacccagatagaaaatcagcatccttagtcggtttatatcatggcgag
gtaaacgatctcgaatttgattacattcgtcctcaggaaaatggttacagatcagacatt
cgctggctaaagcttgttgataatgccggtactggatttactgtgaaggggaaccataac
ttcggattttcagcacgaaattatcctgaaagcgagctagaccctggggataaaaaagca
caacgtcacatccatgatgttaagtcccatgatttagttgaggttaatgttgattactta
cagtcgggtttgggcggcgatacgagttggggggctaagcctttaccccagtatcaaatt
ccacctgcgaactactcgtttggcttttcgttagtaccatcctctgatgagcatgacgat
gcagcgagttatcaaaaaattggcaactacaactatcactaa
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