Shewanella avicenniae: JYB87_14265
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Entry
JYB87_14265 CDS
T07845
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
savi
Shewanella avicenniae
Pathway
savi00020
Citrate cycle (TCA cycle)
savi00270
Cysteine and methionine metabolism
savi00620
Pyruvate metabolism
savi00630
Glyoxylate and dicarboxylate metabolism
savi00680
Methane metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01120
Microbial metabolism in diverse environments
savi01200
Carbon metabolism
Module
savi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
savi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
savi_M00012
Glyoxylate cycle
savi_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB87_14265 (mdh)
00620 Pyruvate metabolism
JYB87_14265 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
JYB87_14265 (mdh)
09102 Energy metabolism
00680 Methane metabolism
JYB87_14265 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JYB87_14265 (mdh)
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
JYB87_14265 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QSX32895
LinkDB
All DBs
Position
complement(3212991..3213926)
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AA seq
311 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFSG
EDPSPALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAATCPKALIGIITNP
VNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKINVIGGHSGV
TILPLLSQVEGVSFSDDEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVR
GLLGEANVVECAYVDGGSEHATFFAQPVLLGKNGIEQVLPYGDVSAFEAQARDSMLDTLN
ADIQLGVEFVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgccgtacttggtgctgctggtggtattggccaggctcttgcacttttgctg
aagacccaattacctgcaggttctcagctgtcgttgtatgatattgcccctgttacccca
ggtgttgcggttgatttaagccacatccctacagccgtagaaataaaaggattttccgga
gaagatccttcaccagcgctcgttggtgcagatgtagtgttaatttctgcgggtgtagcg
cgtaaacccggaatggatcgctctgatctgttcaatatcaacgcgggtattgtgcgtaac
ttgattgaaaaagttgctgcaacctgcccgaaagccttgattggtattatcaccaaccca
gttaacacgactgttgctatcgcggctgaagtgttgaaaaaggccggtgtttacgacaaa
aatcgcttgttcggtgtcacgaccttagacgtgattcgttctgaaacctttattgctgaa
cttaaagggctgaacgttgctgacgttaaaattaacgtcattggcggtcacagcggtgtg
actattctgccgttactgtcgcaagttgaaggtgtgagcttcagcgatgatgaagttgcc
tcactcactaaacgtattcaaaacgcgggtactgaagtagttgaagccaaggccggtggc
ggtagtgccacgttgtcgatggggcaagcggcttgtcgctttggtctgtcgttggtgcgt
ggtctgcttggtgaagcgaatgttgttgaatgcgcctatgttgatggcggcagcgaacat
gcaaccttcttcgcccaaccggtattgctcggtaaaaatggtattgagcaagtactgcct
tacggtgacgttagcgcatttgaagcgcaagcacgcgacagtatgctcgatactctaaac
gccgatattcagctgggtgttgagttcgttaaataa
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