Shewanella avicenniae: JYB87_16015
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Entry
JYB87_16015 CDS
T07845
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
savi
Shewanella avicenniae
Pathway
savi00130
Ubiquinone and other terpenoid-quinone biosynthesis
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01240
Biosynthesis of cofactors
Module
savi_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
JYB87_16015 (ubiD)
Enzymes [BR:
savi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
JYB87_16015 (ubiD)
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Ortholog
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
QSX33209
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Position
3641082..3642563
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AA seq
493 aa
AA seq
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MSFKDLRSFLNHLESQGELKRISHPVDPHLEMTEIGDRVLRNGGPALLFENPIGKSMPVL
LNLFGTPKRVAMALGKDDPLALREVGELLSFLKEPEPPRGFKDAIEKLPLFRQALNMPPK
TVRKAPCQEVVISGDDVDLTQLPVQHCWPGDAAPLVTWGLTITKGPRQKRQNIGIYRQQL
LGKNKLIMRWLSHRGGALDFQDFKEKFPGEKYPVVVALGSDPVTILGAVTPVPDGMSEYA
FAGLLRGERTEVTKSLTCDLEVPATSEIILEGYIDPDEMAVEGPYGDHTGYYNETDKFPV
FTVTHMTHRKDAIYHSTYTGRPPDEPAMLGLALNEVFVPILRKQYPEIVDFYLPPEGCSY
RMAVISMRKQYAGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWKDVIWAITTRMDP
IRDTVLMDNTPIDYLDFASPVAGLGSKMGLDATNKWPGETQREWGTPIKMDDAVKQKIDQ
IWDKLGIDDAPTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcagctttctaaatcacttagaaagtcagggagagttaaaa
cgtattagccaccctgtcgatccgcacttagagatgacagaaattggcgatcgcgttttg
cgtaacggtggtccggcgttgctgtttgagaaccccatcggcaaatcgatgccggtgctg
ctcaacctgtttggcacgccaaaacgggtggcaatggcgctgggaaaagatgacccgtta
gccctgcgtgaagtgggcgaactgctgtcgtttttgaaagaacctgagccaccacgcggc
tttaaagatgccattgaaaagctgccactgtttaggcaagcgctaaacatgccaccgaaa
acagtgcgcaaagcgccatgtcaggaagtggtcatcagtggtgatgatgtcgatctcact
caactgccagtacaacattgctggccgggtgatgctgcgcccttggtcacttgggggtta
accatcaccaaaggcccgcggcagaagcggcaaaatatcggcatctatcgccagcagttg
ttgggtaaaaataagctgatcatgcgttggctgtcccatcgtggcggtgccctcgatttc
caagatttcaaagagaaatttcccggcgaaaaatatccggtggtggtggcactgggcagc
gatcctgtcactattctgggtgctgtgacacctgtgcccgatggcatgagtgaatacgcg
tttgcgggtttactgcgcggtgaacgcaccgaagtgactaaatcactcacctgtgattta
gaagtgcccgccaccagcgaaatcattctcgaaggctatatcgatcccgacgagatggcg
gtggaaggcccctacggcgaccatacgggttactacaacgaaaccgataaattcccggtc
tttactgtgacccatatgacccatcgtaaagatgcgatctaccacagcacttataccggc
cgtccacccgatgaaccggcgatgttgggcttggcactgaacgaagtatttgtgccgatt
ctgcgcaagcaatacccagaaattgtcgacttttacttgccgccagaaggttgctcctat
cgcatggcggtgatctcgatgcgtaaacaatacgcggggcatgccaaacgggtgatgatg
ggcgcatggtcgtttttgcgccagtttatgtacactaaatttattgtggtagtggatgat
gatgtgaactgccgcgattggaaagacgtgatttgggcgattaccactcgcatggatccg
atccgcgatacggtgttaatggacaacacccctatcgattatcttgattttgcctcaccc
gtggctggcctaggctcgaaaatggggcttgatgccaccaacaaatggcccggtgaaacc
caacgtgaatggggtacaccaatcaagatggatgacgctgttaaacagaagattgaccag
atttgggacaaactcggcattgatgacgcgccgacactgtaa
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