Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA): USA300HOU_1196
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Entry
USA300HOU_1196 CDS
T00629
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sax
Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA)
Pathway
sax03030
DNA replication
sax03430
Mismatch repair
sax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
USA300HOU_1196 (dnaE1)
03430 Mismatch repair
USA300HOU_1196 (dnaE1)
03440 Homologous recombination
USA300HOU_1196 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sax03032
]
USA300HOU_1196 (dnaE1)
03400 DNA repair and recombination proteins [BR:
sax03400
]
USA300HOU_1196 (dnaE1)
Enzymes [BR:
sax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
USA300HOU_1196 (dnaE1)
DNA replication proteins [BR:
sax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
USA300HOU_1196 (dnaE1)
DNA repair and recombination proteins [BR:
sax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
USA300HOU_1196 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
Ribosomal_S19e
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ABX29210
LinkDB
All DBs
Position
1283442..1287752
Genome browser
AA seq
1436 aa
AA seq
DB search
MTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEFHITLPQFLAHEDYLLF
INAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCIDQTALSPKVKGQLKQKKLIMSG
KVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDIDKIIFETNDNDQEQNLASLEAHIQE
EDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGKPIQIENIKPIESIIEEEFKVAI
EGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQGR
IEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRVEFHLHTAMSQMDGIPNIGAYVKQAAD
WGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMIYGMEGMLVDDGVPIAYKPQDVVLKDATY
VVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDDMLV
DAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTIN
TEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVLNHNEINKKLSN
EDAYKRARPSHVTLIVQNQQGLKNLFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVGTA
CDEGELFTAVMQKDQSQVEKIAKYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRLIH
AGDTAGIPVIATGNAHYLFEHDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEFHF
LGEEKAHEIVVKNTNELADRIERVVPIKDELYTPRMEGANEEIRELSYANARKLYGEDLP
QIVIDRLEKELKSIIGNGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEV
NPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGFKGDK
VPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHKRG
AEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFHSI
HDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILCKT
GTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSSVI
GCRDDIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIETMKENEVPDWYLDSCLKIKYM
FPKAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSIRNTVKDMYS
RYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPGLG
ENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcaacaaaaatttaaagtgcttgctgatcaaattaaaatttcaaatcaatta
gatgctgaaattttaaattcaggtgaactgacacgtatagatgtttctaacaaaaacaga
acatgggaatttcatattacattaccacaattcttagctcatgaagattatttattattt
ataaatgcaatagagcaagagtttaaagatatcgccaacgttacatgtcgttttacggta
acaaatggcacgaatcaagatgaacatgcaattaaatactttgggcactgtattgaccaa
acagctttatctccaaaagttaaaggtcaattgaaacagaaaaagcttattatgtctgga
aaagtattaaaagtaatggtatcaaatgacattgaacgtaatcattttgataaggcatgt
aatggaagtcttatcaaagcgtttagaaattgtggttttgatatcgataaaatcatattc
gaaacaaatgataatgatcaagaacaaaacttagcttctttagaagcacatattcaagaa
gaagacgaacaaagtgcacgattggcaacagagaaacttgaaaaaatgaaagctgaaaaa
gcgaaacaacaagataacaacgaaagtgctgtcgataagtgtcaaattggtaagccgatt
caaattgaaaatattaaaccaattgaatctattattgaggaagagtttaaagttgcaata
gagggtgtcatttttgatataaacttaaaagaacttaaaagtggtcgccatatcgtagaa
attaaagtgactgactatacggactctttagttttaaaaatgtttactcgtaaaaacaaa
gatgatttagaacattttaaagcgctaagtgttggtaaatgggttagggctcaaggtcgt
attgaagaagatacatttattagagatttagttatgatgatgtctgatattgaagagatt
aaaaaagcgacaaaaaaagataaggctgaagaaaagcgtgtagaattccacttgcatact
gcaatgagccaaatggatggtatacccaatattggtgcgtatgttaaacaggcagcagac
tggggacatccagccattgcggttacagaccataatgttgtgcaagcatttccagatgct
cacgcagcagcggaaaaacatggcattaaaatgatatacggtatggaaggtatgttagtt
gatgatggtgttccgattgcatacaaaccacaagatgtcgtattaaaagatgctacttat
gttgtgttcgacgttgagacaactggtttatcaaatcagtatgataaaatcatcgagctt
gcagctgtgaaagttcataacggtgaaatcatcgataagtttgaaaggtttagtaatccg
catgaacgattatcggaaacgattatcaatttgacgcatattactgatgatatgttagta
gatgcccctgagattgaagaagtacttacagagtttaaagaatgggttggcgatgcgata
ttcgtagcgcataatgcttcgtttgatatgggcttcatcgatacgggatatgaacgtctt
gggtttggaccatcaacgaatggtgttatcgatactttagaattatctcgtacgattaat
actgaatatggtaaacatggtttgaatttcttggctaaaaaatatggcgtagaattaacg
caacatcaccgtgccatttatgatacagaagcaacagcttacattttcataaaaatggtt
caacaaatgaaagaattaggcgtattaaatcataacgaaatcaacaaaaaactcagtaat
gaagatgcatataaacgtgcaagacctagtcatgtcacattaattgtacaaaaccaacaa
ggtcttaaaaatctatttaaaattgtaagtgcatcattggtgaagtatttctaccgtaca
cctcgaattccacgttcattgttagatgaatatcgtgagggattattggtaggtacagcg
tgtgatgaaggtgaattatttacggcagttatgcagaaggaccagagtcaagttgaaaaa
attgccaaatattatgattttattgaaattcaaccaccggcactttatcaagatttaatt
gatagagagcttattagagatactgaaacattacatgaaatttatcaacgtttaatacat
gcaggtgacacagcgggtatacctgttattgcgacaggaaatgcacactatttgtttgaa
catgatggtatcgcacgtaaaattttaatagcatcacaacccggcaatccacttaatcgc
tcaactttaccggaagcacattttagaactacagatgaaatgttaaacgagtttcatttt
ttaggtgaagaaaaagcgcatgaaattgttgtgaaaaatacaaacgaattagcagatcga
attgaacgtgttgttcctattaaagatgaattatacacaccgcgtatggaaggtgctaac
gaagaaattagagaactaagttatgcaaatgcgcgtaaactgtatggtgaagacctgcct
caaatcgtaattgatcgattagaaaaagaattaaaaagtattatcggtaatggatttgcg
gtaatttacttaatttcgcaacgtttagttaaaaaatcattagatgatggatacttagtt
ggttcccgtggttcagtaggttctagttttgtagcgacaatgactgagattactgaagta
aacccgttaccgccacactatatttgtccgaactgtaaaacgagtgaatttttcaatgat
ggttcagtaggatcaggatttgatttacctgataagacgtgtgaaacttgtggagcgcca
cttattaaagaaggacaagatattccgtttgaaacatttttaggatttaagggagataaa
gttcctgatatcgacttaaactttagtggtgaatatcaaccgaatgcccataactacaca
aaagtattatttggtgaggataaagtattccgtgcaggtacaattggtactgttgctgaa
aagactgcttttggttatgttaaaggttatttgaatgatcaaggtatccacaaaagaggt
gctgaaatagatcgactcgttaaaggatgtacaggtgttaaacgtacaactggacagcat
ccagggggtattattgtagtacctgattacatggatatttatgattttacgccgatacaa
tatcctgccgatgatcaaaattcagcatggatgacgacacattttgatttccattctatt
catgataatgtattaaaacttgatatacttggacacgatgatccaacaatgattcgtatg
cttcaagatttatcaggaattgatccaaaaacaatacctgtagatgataaagaagttatg
cagatatttagtacacctgaaagtttgggtgttactgaagatgaaattttatgtaaaaca
ggtacatttggggtaccagaattcggtacaggattcgtgcgtcaaatgttagaagataca
aagccaacaacattttctgaattagttcaaatctcaggattatctcatggtacagatgtg
tggttaggcaatgctcaagaattaattaaaaccggtatatgtgatttatcaagtgtaatt
ggttgtcgtgatgatatcatggtttatttaatgtatgctggtttagaaccatcaatggct
tttaaaataatggagtcagtacgtaaaggtaaaggtttaactgaagaaatgattgaaacg
atgaaagaaaatgaagtgccagattggtatttagattcatgtcttaaaattaagtacatg
ttccctaaagcccatgcagcagcatacgttttaatggcagtacgtatcgcatatttcaaa
gtacatcatccactttattactatgcatcttactttacaattcgtgcgtcagactttgat
ttaatcacgatgattaaagataaaacaagcattcgaaatactgtaaaagacatgtattct
cgctatatggatctaggtaaaaaagaaaaagacgtattaacagtcttggaaattatgaat
gaaatggcgcatcgaggttatcgaatgcaaccgattagtttagaaaagagtcaggcgttc
gaatttatcattgaaggcgatacacttattccgccgttcatatcagtgcctgggcttggc
gaaaacgttgcgaaacgaattgttgaagctcgtgacgatggcccatttttatcaaaagaa
gatttaaacaaaaaagctggattatctcagaaaattattgagtatttagatgagttaggc
tcattaccgaatttaccagataaagctcaactttcgatatttgatatgtaa
DBGET
integrated database retrieval system
