KEGG   Shewanella amazonensis: Sama_0708
Entry
Sama_0708         CDS       T00445                                 
Name
(GenBank) type II/IV secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
saz  Shewanella amazonensis
Pathway
saz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:saz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sama_0708
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saz02044]
    Sama_0708
   02035 Bacterial motility proteins [BR:saz02035]
    Sama_0708
Enzymes [BR:saz01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Sama_0708
Secretion system [BR:saz02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Sama_0708
Bacterial motility proteins [BR:saz02035]
 Pilus system
  Pilus assembly proteins
   Sama_0708
SSDB
Motif
Pfam: T2SSE Yop-YscD_cpl FHA ABC_tran AAA_16 Sigma54_activ_2 Zeta_toxin nSTAND3 AAA_28 FtsK_SpoIIIE AAA_29 KAP_NTPase cobW AAA_7 AAA_23 AAA_22 AAA_19 Pox_A32 Mg_chelatase ATP_bind_1 AAA_30 Sigma54_activat TsaE RsgA_GTPase Viral_helicase1
Other DBs
NCBI-ProteinID: ABL98916
UniProt: A1S3G0
LinkDB
Position
870224..871993
AA seq 589 aa
MFNIIVSTTKGTKVGEFNCIHRECHIGKDPGHLIVLRGIKVARHHATLRREDDGIFIEDN
RSMTGLRVNEQREKLFGPLKYTDKIQIGDYFIRVQDSDSGSGFTTESAAPDTTPAGTNAT
DVPAHPADASLSSVSAQLSVSALPGAVATGKAKPPEAQTPEREQIKLRNHWRRQVHRELL
KQFDLRRVNVNEMSDIELREQSEALILHIVGQMALPETIAATDLIREVLDETIGLGPLEA
LIADADVTEIMVNSHDQIFFEKSGQLYLSDISFSDDQAVLGAIERIVAPIGRRIDEGSPM
VDARLKDGSRVNAVIPPLALKGPCITIRKFMQRRLGASDLVGFGSMSQHMADFLEMAVKQ
KCNVVISGGTGSGKTTLLNVLSNFIPEDERIITVEDAAELRLYQPNLVSLEARPPNQEGK
GAIEIRDLVKNCLRMRPDRVVIGECRGGEALDMLQAMNTGHDGSLTTAHSNSPRDCISRL
EVMVMMSGMDLPIQAIREQIASAVNIIVQQSRFSDGSRRITSICEVTGMEGSTVQLSEIF
KFQQTGFSEQGKVMGFYTATGTIPEFYESLRRRGVRVQLDIFDRDARYG
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgtttaacatcatcgtcagtacgaccaagggaaccaaggtcggtgaattcaactgtatt
caccgtgagtgccatatcggtaaggacccggggcacctgattgtgcttcggggcattaag
gtggcccgtcatcacgctacactgcgccgggaagatgacggcattttcatcgaagacaac
cgcagcatgacaggcctgagggtaaacgagcagcgggagaagctgtttggccccctcaaa
tacacggataaaatccagattggggattattttattcgggtgcaggactcagacagcggc
agcggattcaccaccgaatcagcggcgcctgataccactccggctggcaccaatgccaca
gacgtgcctgctcatcctgccgacgcgtcattatcaagtgtcagcgcgcaattaagcgtc
agtgcgctcccgggcgccgttgccaccggaaaagctaaaccacccgaagcgcaaacgccc
gagcgtgagcaaattaagttgcgcaaccactggcgccgtcaggtgcacagggaactctta
aaacagttcgatttgcgtcgggtaaatgtcaatgaaatgagtgatatagagcttcgtgaa
cagagtgaagccctgatattgcacatagtcggccaaatggccttgcccgagaccattgcc
gccaccgaccttatccgcgaagtgctggatgagaccataggtcttgggccccttgaggcc
ctgattgctgacgcagatgtcacagaaatcatggtcaacagccacgaccaaatcttcttc
gagaagtccgggcaattgtatttgtctgatatttccttctctgacgatcaggcggtgctg
ggggccatcgagcgcatcgtggcccccattggccggcgtatcgacgaaggctcgcccatg
gtggatgcccgtttgaaggacggctcgcgggtaaacgccgtgatcccgccgctggcactc
aagggcccctgtatcaccatccgtaaatttatgcagcgtcgtctgggtgccagcgacctg
gttggctttggttccatgagtcagcacatggcggacttcctggaaatggcggtgaagcag
aagtgcaatgtggtgatatccggcggtaccggctcgggtaaaaccaccttgctcaacgtg
ctgtcgaattttatcccggaagatgagcgcatcattaccgtggaggatgcggcagagctc
aggttgtatcagcccaacctggtttccctggaagcgcgtccgcccaaccaggaaggcaag
ggtgccattgagattcgcgatctggtgaaaaactgtttgcggatgcgccccgaccgggtg
gtgattggtgagtgccgcggcggtgaggcgctggacatgctgcaggccatgaacaccggt
cacgacggttctctgaccacggcccactccaactcccccagggactgtatttcgcgcctg
gaggtgatggtgatgatgtcgggtatggacctgcccattcaggccattcgcgaacaaatt
gcctctgcggtcaatatcatagtgcagcaatcgcgcttctcagatggttcgaggcgtatc
accagcatctgtgaagtcaccgggatggaaggcagtactgtgcagctgtcagaaatattt
aagtttcagcagaccggcttcagtgagcagggcaaggtgatggggttttataccgccaca
ggtaccattcccgagttttacgagtctctgcgccgacggggagtgcgggttcagttggat
atcttcgacagggatgcgcgttatgggtga

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