Shewanella amazonensis: Sama_1216
Help
Entry
Sama_1216 CDS
T00445
Name
(GenBank) glutaminyl-tRNA synthetase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
saz
Shewanella amazonensis
Pathway
saz00970
Aminoacyl-tRNA biosynthesis
saz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sama_1216
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saz01007
]
Sama_1216
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_1216
Enzymes [BR:
saz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
Sama_1216
Amino acid related enzymes [BR:
saz01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Sama_1216
Transfer RNA biogenesis [BR:
saz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sama_1216
Prokaryotic type
Other AARSs
Sama_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
ABL99423
UniProt:
A1S4W7
LinkDB
All DBs
Position
1497161..1498828
Genome browser
AA seq
555 aa
AA seq
DB search
MSHVDNEVRPSNFIRNIIDEDLASGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGIAEDY
KGQCNLRFDDTNPEKEDIDYVNSIQEDVKWLGFQWDGEVRYSSNYFDELYGYAVELINKG
LAYVCFLNAEETREYRGTLKEPGRNSPYRDTSPEENLALFEKMRDGGFKEGECVLRAKID
MASPFMCMRDPVIYRVKFAHHHQTGDKWCIYPMYDFTHCISDALENITHSLCTLEFQDNR
RLYDWVLDNLNDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVVRGLVSGWDDPRMPTIA
GLRRRGYTPASIREFCQRIGVTKQDNLVEVGMLEACIREDLNENAPRAMAVIRPIKVIIE
NFTAPELEYVKAPVHPNLEEMGERELAFGREIYIDAADFREEANKQYKRLVLGKEVRLRN
AYVIRAERCEKDAEGNVTTVYCTYDPETLGQNPSDGRKVKGVIHWVEATTALPAEFRLYD
RLFIDANPAAAETVDEVLNPASLEVVHGFAEAPLANAKASQAYQFEREGYFCADSKDSAP
GKLVFNLTVALRESF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtggacaacgaagtacgtcccagtaacttcattcgcaacatcatagatgaa
gatttggccagcggtaagcacaccagtgtgcacacacgttttccgccggagccaaacggc
tatctgcacattggtcacgccaaatccatctgcctgaacttcggtatcgcagaggattac
aagggccagtgcaacctgcgttttgatgataccaatcctgaaaaagaagacatcgactat
gtcaactcaattcaggaagacgttaagtggctcggattccagtgggatggcgaggttcgc
tattcatccaactatttcgatgagctttacggctatgcagttgaattgatcaacaagggc
ctggcttatgtgtgttttctcaatgccgaggaaacccgcgaataccgtggcactctgaaa
gagccgggccgtaacagcccttatcgtgacacctctcccgaagaaaacctggcgctgttt
gaaaagatgcgcgacggtggcttcaaagaaggtgagtgcgtactgcgtgccaaaatcgat
atggcgtcgccctttatgtgtatgcgcgaccctgtgatttaccgcgtgaagtttgcccat
caccaccagaccggtgacaagtggtgcatctatccgatgtacgactttacccactgtatt
tcagacgcgctggaaaacatcacccattcgctgtgtacgctggagttccaggacaaccgt
cgtctgtacgactgggtgctggataacctcaatgatttccaggcgcctaaccgtacccgt
cagtacgagttttcccgtctgaatcttgaatacaccctgatgtccaagcgcaagctgaac
gacttggtggtacgtggtctggtgtccggttgggacgaccctcgcatgccaaccatcgcc
ggtctgcgtcgccgtggttacacgccagcgtctatccgcgagttttgtcagcgcattggt
gtgaccaagcaggacaacctggttgaagtaggcatgcttgaagcctgtattcgtgaagac
ctcaacgaaaatgccccacgcgccatggccgttattcgccctattaaggtgatcatcgaa
aacttcaccgctccagagcttgagtatgtgaaggcgcctgtgcaccccaacctcgaagag
atgggtgagcgtgagctggcgttcggccgtgagatttacatcgacgccgccgacttccgc
gaagaagccaacaaacagtacaagcgtttggtgctgggcaaggaagtgcgtctgcgtaat
gcttatgtgattcgagccgagcgctgcgaaaaagatgccgaaggcaatgtcaccaccgtt
tactgcacctatgatcctgagactctgggccaaaacccaagtgatggccgtaaggtgaaa
ggtgttattcactgggtagaagccaccactgcgctgcctgctgagttccgcctgtacgat
cgcctgttcatcgatgcgaatccggccgctgctgagaccgtggatgaagtgctgaaccca
gcctcgttggaagtggtgcacggctttgctgaggcgccgctggccaacgccaaagcctct
caggcatatcagtttgagcgtgaaggctacttctgcgccgacagcaaagactcggctccg
ggcaagttggtgtttaacctgacggtggctctgcgcgaatccttctga
DBGET
integrated database retrieval system
