Shewanella amazonensis: Sama_2167
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Entry
Sama_2167 CDS
T00445
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
saz
Shewanella amazonensis
Pathway
saz00071
Fatty acid degradation
saz00280
Valine, leucine and isoleucine degradation
saz00310
Lysine degradation
saz00362
Benzoate degradation
saz00380
Tryptophan metabolism
saz00410
beta-Alanine metabolism
saz00640
Propanoate metabolism
saz00650
Butanoate metabolism
saz00907
Pinene, camphor and geraniol degradation
saz00930
Caprolactam degradation
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01120
Microbial metabolism in diverse environments
saz01200
Carbon metabolism
saz01212
Fatty acid metabolism
Module
saz_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sama_2167
00650 Butanoate metabolism
Sama_2167
09103 Lipid metabolism
00071 Fatty acid degradation
Sama_2167
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sama_2167
00310 Lysine degradation
Sama_2167
00380 Tryptophan metabolism
Sama_2167
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sama_2167
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sama_2167
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sama_2167
00930 Caprolactam degradation
Sama_2167
Enzymes [BR:
saz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sama_2167
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sama_2167
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sama_2167
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF4684
Motif
Other DBs
NCBI-ProteinID:
ABM00373
UniProt:
A1S7L6
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All DBs
Position
complement(2620722..2622842)
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AA seq
706 aa
AA seq
DB search
MEKTFSLSRRDDGIALLTMDVPGETMNTLKAQFAPEITAILQEIKADSSIKGLVLISGKA
DSFVAGADISMLDACETAEDARLLSRQGHHVFAELEGLNIPVVAAIHGACLGGGLELALA
CHQRVCSDSSKTMLGVPEVQLGLLPGGGGTQRLPRLIGIAKALDLMLTGKQVRPKQAVKM
GLVDDVVPESILLDTAIEMALAGKKTRKPLKQPLVTKLLEGTPVGRNIMFDQATKQVLKK
TQGNYPSPLKIIDCVREGMAKGMEKGLEVEAAHFGALVATPESAALRSIFFATTEMKKET
GAGDAKPRKVAKAVVLGGGLMGGGIASVTTTKAKVPVRVKDISDKGLSNALGYAYKLLDK
GVKRRHMTSAERDKLMALMTTTTEYRGVKDADIVVEAVFEDLNLKHQMVRDIERECGEHT
IFASNTSSLPITQIAAAASRPENVIGLHYFSPVEKMPLVEVIAHEKTSPETIATTVAFAR
KQGKTPIVVKDCAGFYVNRILALYMNEAAQLLLEGQAVDHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLMADDRKGRKNGKGFYLYGKAAKKGKKVDES
VYSLLGLTPATGKEAGEIAERCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLG
GPFRYMDTLGAAKMVRLLEGYQSKYGDRFAPAALLKAMAAEGKTFY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacttttagcctaagccgccgtgacgacggcatcgcgctgctgaccatggat
gtgcccggtgaaaccatgaacaccctgaaggcgcagtttgctccggagatcaccgcgata
ttgcaggaaatcaaagcggatagcagcatcaagggcctggttctgatttccggcaaagcc
gactcctttgtggccggtgccgatatttccatgttggatgcctgtgaaaccgcagaagac
gcaagattgctgtcccgtcagggtcaccacgtgtttgccgagttggaagggctgaatatt
ccggtggtggccgccattcatggtgcctgccttggtggtggtttggagttggcactggca
tgccatcagcgggtgtgcagcgacagcagcaaaaccatgcttggcgtgccggaagtgcag
ttaggcctgctgcccggcggcggtggaacccagcgtttgccgcgcttgattggtattgcc
aaggcgctcgatttgatgcttaccggtaagcaggtgcgccccaagcaggccgtcaaaatg
gggctggtggatgatgtagtgcccgagtccattctgctcgataccgccattgagatggcg
ttagccggtaaaaagacccgcaagccattgaagcaaccgctggtgaccaaacttttggaa
ggcacgcctgttggtcgcaacatcatgttcgatcaggccaccaagcaagttctgaaaaag
acgcagggcaactatccatcaccactgaaaattattgattgcgtgcgggaaggtatggcc
aagggcatggagaaaggcctggaagtcgaagcggcgcactttggcgccttggtggctacc
cctgagtccgcggcgctgcgctctattttctttgcgaccaccgaaatgaaaaaagaaacc
ggtgccggagatgccaagccccgcaaggtggccaaagccgtggtgctgggtggcggtctg
atgggcggcggtattgcctctgttacaaccaccaaggctaaagtgcctgtgcgggtgaag
gatatcagcgataagggcctgtccaatgcccttggctacgcgtataaactgctggataag
ggcgtgaagcgccgccatatgacgagcgcagagcgtgacaagttgatggcattgatgacc
accaccactgaatatcgtggtgtgaaggatgccgatatcgtggtcgaagcggtatttgaa
gacctgaatctcaaacatcagatggtgcgcgatattgagagagaatgtggcgagcacacc
atttttgcctccaacacctcgtctttgcctattacccaaatcgcggcggcggccagccgt
cctgaaaatgtgattggtctgcattacttctcgccggtggaaaaaatgccgctggtagaa
gtgattgcccatgagaagacatcgccagagaccattgcaaccacagtagcctttgcccgt
aagcaggggaaaaccccgattgtggttaaggactgtgccggtttttatgtgaaccgtatt
ttggcgctctacatgaatgaggccgctcagctcttattggaagggcaggcagttgatcat
ttggacaaggcactggtgaagtttggtttccctgttggtcccatgaccttgctggatgaa
gtgggcattgatgtgggcgccaagatttcgcccattcttgaaaaagagttaggtgagcgg
ttcaaggctccggctgcgtttgacaaactcatggccgacgatcgcaaaggtcgtaaaaac
ggtaagggtttctacctgtacggtaaagccgccaaaaaaggtaaaaaagtcgacgaaagt
gtttacagcttgcttggcttaacaccggcaaccggtaaagaagccggtgaaatcgccgag
cgttgtgtggtgcagatgcttaatgaagcggttcgctgcctggaggaaggcataattgca
tctccacgtgatggtgatattggcgctatctttggcattggtttcccgccgttcctgggg
gggcctttccgttatatggatactttgggcgccgctaagatggtaagactgctggaaggt
tatcagagcaagtatggtgacaggtttgcaccagcagcactgcttaaagccatggccgca
gagggcaaaaccttttattaa
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