Shewanella amazonensis: Sama_2431
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Entry
Sama_2431 CDS
T00445
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
saz
Shewanella amazonensis
Pathway
saz00730
Thiamine metabolism
saz01100
Metabolic pathways
saz01240
Biosynthesis of cofactors
saz04122
Sulfur relay system
Module
saz_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sama_2431
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Sama_2431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_2431
Enzymes [BR:
saz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Sama_2431
Transfer RNA biogenesis [BR:
saz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sama_2431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
ABM00636
UniProt:
A1S8C9
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All DBs
Position
complement(2924723..2926177)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMIKSKPVRMRFTKMLESNIRNVLKKIDEDAKVQRQWDKIMVKVPKDKPE
LTELFAERLAHIPGIHHVLQVAEYDFETVDDIYQLALPVYRDMLKDKTFCVRVKRAGQHD
FNSIEVERYVGGGLNQFTEAKGVQLKNPDVTIQLEIDRDKLYMVSQRIEGLGGFPIAAQE
DVLSLISGGFDSGVASFQFIKKGSRTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEEVVTEILERIENGQMGVVLKRMMMRAATRVAERMGIQALVTGESLGQVSSQTL
TNLNVIDRSTDLLILRPLISMDKPDIIREARRIGTEDFAASMPEYCGVISQRPTVKAVLS
KVEAEEQKFSEDLLDRVLAKAEVIDIRDIAVATSERVTETETVSSAAGNEVIIDIRAPEE
EESRPLDVDGVEVKVIPFFKLATAFAELDKDKTYLLYCERGVMSKLQALYLQEQGYNNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgttaagctgtatcccgaaatcatgattaagagcaaaccggtaagaatg
cgttttaccaagatgctcgagtccaatatccgcaatgtgctgaaaaaaatcgatgaggat
gccaaggtacagcgccaatgggacaagatcatggtgaaggtgcccaaagacaagcctgag
cttaccgagctctttgccgagcgtctggctcatattccaggtattcatcatgtgctgcag
gtggccgagtacgactttgaaaccgtggatgatatctatcagctcgcgctgcctgtgtat
cgcgacatgctcaaggacaaaaccttttgtgtgcgggtaaagcgtgccggtcaacacgat
ttcaactccatcgaggttgagcgttatgttggcggcggtttaaaccagtttaccgaagcc
aagggcgtgcagctgaagaacccggatgtgaccatccagctcgaaatcgatcgcgacaag
ctctatatggtcagccagcgcatcgagggtttggggggcttccccattgccgctcaggaa
gacgtgctgtctttgatttccggtggctttgactcgggcgtggccagcttccagtttatt
aaaaagggttcccgtacccattattgtttcttcaatcttggtggcgcccagcacgaaatc
ggcgtgaaacaagtggcctaccacctgtggaagacctacggcgagtcgcacaaagtgaag
tttgtgtctgtgcccttcgaagaagtggtaacagaaatcctcgagcgtatcgaaaacggt
cagatgggtgtggtgcttaagcgcatgatgatgcgcgccgccacccgtgtggccgaacgc
atgggtattcaggctctggtcactggtgagagcctgggtcaggtgtcgagccagaccctg
accaaccttaatgtcattgaccgcagcaccgacctcttgatcctgcgtccgctgatcagc
atggataaaccggacattatccgcgaagcgcgccgcataggtaccgaagatttcgcggcc
tccatgcccgagtattgtggtgtgatttcccagcgccctaccgtgaaggcggtactctcc
aaggtggaagccgaagagcagaagttttctgaagacctgctcgaccgcgtgctggcgaaa
gcagaagtgattgatatccgtgatattgctgttgccaccagtgagcgagtgactgaaacc
gagaccgtctccagtgcggccggaaacgaagttatcatcgacattcgcgcgccagaagaa
gaagagtccagacccctggacgtggacggcgttgaagtgaaggtaatccccttcttcaaa
ctggcgactgcttttgccgagctcgataaagacaaaacgtatctgctttactgcgaacgt
ggcgttatgagtaagctgcaagccctgtatctgcaagagcagggctacaataacgtgaag
gtatatcgtccctga
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