KEGG   Shewanella amazonensis: Sama_2676
Entry
Sama_2676         CDS       T00445                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
saz  Shewanella amazonensis
Pathway
saz00250  Alanine, aspartate and glutamate metabolism
saz00330  Arginine and proline metabolism
saz01100  Metabolic pathways
saz01110  Biosynthesis of secondary metabolites
Module
saz_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:saz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Sama_2676
   00330 Arginine and proline metabolism
    Sama_2676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:saz03000]
    Sama_2676
Enzymes [BR:saz01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Sama_2676
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Sama_2676
Transcription factors [BR:saz03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Sama_2676
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: ABM00879
UniProt: A1S922
LinkDB
Position
3201868..3205044
AA seq 1058 aa
MFKASEVLAGRYDNANLDELFSLISQNYIVDEEAYLKELIALVPSSDEEIARITSRAHDL
VAKVRQYEKKGLMVGIDAFLQQYSLETQEGIILMCLAEALLRIPDAETADALIADKLSGA
KWDEHMSKSDSVLVNASTWGLMLTGKIVQLDKNLDGTPSNLLSRLVNRLGEPVIRQAMYA
AMKIMGKQFVLGRTIEEGLKNAAEKRKLGYTHSYDMLGEAALTMKDADKYYRDYANAIQA
LGTAKFDESEAPRPTISIKLSALHPRYEVANEDRVMTELYATLIKLIEQARSLNVGIQID
AEEVDRLELSLKLFKKLYQSDAAKGWGLLGIVVQAYSKRALPVLMWLTRLAKEQGDEIPL
RLVKGAYWDSELKWAQQAGEAGYPLFTRKAATDVSYLACARYLLSEATRGVIYPQFASHN
AQTVAAITAMVGDRKFEFQRLHGMGQELYDTVLAEAAVPTVRIYAPIGAHKDLLPYLVRR
LLENGANTSFVHKLVDPKTPIESLVTHPLKTLQGYKTLANNKIVKPADIFGAERKNSKGL
NMNIISESEPFFAALEKFKDTQWSAGPLVNGETLSGEVRDVVSPYNTTLKVGQVAFANEA
TIEQAIAGADKAFASWCRTPVETRANALQKLADLLEENREELIALCTREAGKSIQDGIDE
VREAVDFCRYYAVQAKKMMSKPELLPGPTGELNELFLQGRGVFVCISPWNFPLAIFLGQV
AAALATGNTVIAKPAEQTCLIGFRAVQLAHEAGIPKDVLQFLPGTGAVVGAKLTSDERIG
GVCFTGSTTTAKVINRALAGRDGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVSSAFTS
AGQRCSALRVLYLQEDIAERVLDVLKGAMDELTLGNPGSVKTDVGPVIDAAAKANLNAHI
DHIKQVGRLIHQLSLPEGTENGHFVAPTAVEIDSIKVLTKENFGPILHVVRYKAAGLQKV
IDDINSTGFGLTLGIHSRNEGHALEVADKVNVGNVYINRNQIGAVVGVQPFGGQGLSGTG
PKAGGPHYLTRFVTEKTRTNNITAIGGNATLLSLGDAD
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgttcaaagcgagtgaagtactggcaggtcgttacgacaacgccaatctcgacgaattg
ttcagtctgatcagtcaaaactacatcgttgatgaggaagcctacctcaaagaactgatt
gcgctggttccgtcgagcgacgaagaaatcgcgcgcatcaccagccgtgcccacgatctg
gtggccaaggttcgccaatacgagaagaaaggtttgatggttggcattgatgccttcctg
caacagtactctctggaaacccaggaaggcattatcctcatgtgcctggccgaggcgctg
ctgcgtattccggatgccgaaaccgccgacgccctgattgccgacaagctttccggtgcc
aagtgggatgagcacatgtccaagagcgactccgtgctggtaaacgcctccacctggggc
cttatgctcacaggcaaaatcgtccaactcgacaaaaacctcgacggcaccccaagcaat
ctgctgagccgtctggtcaaccgtctgggtgagcctgttattcgtcaggccatgtacgcc
gccatgaaaatcatgggcaagcaattcgtactgggtcgtaccatcgaagaaggcctgaaa
aacgccgccgagaagcgcaagctgggttatacccactcctacgacatgcttggcgaagcc
gccctgaccatgaaggatgccgacaagtactaccgcgattacgccaatgccattcaggca
ctgggtacggccaagtttgatgagagcgaagccccacgtcccaccatttccatcaagctg
tctgccctgcacccacgctacgaagtagccaacgaagacagggtgatgaccgagctgtac
gccaccctgataaagcttatcgagcaggcacgaagtcttaacgtgggcatccagattgat
gctgaagaagtagaccgtctcgaactgtcgctgaaactcttcaaaaagctgtatcagtct
gacgccgccaaaggctggggtttactgggcattgtggtgcaggcttactccaagcgtgct
ttgccagtgttgatgtggctgacccgccttgctaaagaacagggcgatgaaatcccacta
cgcctggtaaaaggcgcttactgggacagcgaactcaagtgggctcagcaagccggtgaa
gcaggctacccgctgtttacccgcaaggctgccaccgacgtgtcttaccttgcctgtgcc
cgttatctgctgtctgaagccacccgcggcgttatctatccgcagtttgccagtcacaac
gcccagacggttgccgccatcaccgccatggtgggcgatcgcaagtttgaattccagcgt
ctgcacggtatgggtcaggaactctatgacactgtgctggccgaagccgccgtacccaca
gtgcgaatctacgccccgataggcgcccacaaggacctgctgccttacctggtgcgtcgt
ctgcttgaaaacggtgccaacacctcatttgtacacaaactggtggatcccaagacgccc
atcgagtcgctggtgacccacccgctgaaaaccctgcaaggctacaagaccctggcaaac
aacaaaatagttaagcccgccgacatcttcggtgctgagcgtaaaaattccaagggactc
aatatgaacatcatttccgaatccgagccattcttcgctgctctggagaaattcaaggac
acccagtggagcgcaggtccgctggtcaacggtgagaccctgtcgggtgaagtgcgtgac
gtagtcagcccatacaacaccaccctgaaagtgggtcaggtcgccttcgcaaacgaagcc
accatagaacaggccattgccggtgccgacaaggcatttgccagctggtgccgcaccccg
gttgagacccgcgccaatgcactgcaaaagctggcggatctgctggaagaaaaccgcgaa
gagctgattgccctgtgtacccgtgaagccggtaagagcattcaggacggtatcgacgaa
gtgcgtgaagccgtggacttctgccgctactacgcggtgcaggccaagaagatgatgagc
aagcctgagctgctcccaggcccaacaggcgagctgaacgaactcttcctgcagggtcgt
ggcgtgtttgtgtgtatcagcccatggaacttcccgctggccatcttcctcggtcaggta
gccgccgcactggcaaccggcaacacagtgattgccaagccagcagagcaaacctgcctg
attggtttccgcgcggtgcagctggcccatgaagccggcattcccaaagacgtactgcaa
ttcctgccgggtacaggtgccgtagtgggtgccaagctgacctccgatgagcgcatcggc
ggcgtgtgctttaccggttctaccaccacagccaaggttatcaaccgtgcgctggccggt
cgtgatggcgccatcatcccgctgattgccgaaaccggtggtcagaacgccatggtggtt
gactccaccagccagcctgaacaggtagtgaacgatgtagtatcttcagcctttaccagc
gccggtcagcgctgctctgccctgcgtgtactctatttgcaggaagacatcgccgaacgc
gttctggacgtgctcaagggtgcaatggatgagctgactctgggtaacccaggctcagtg
aagaccgacgtaggccctgtgattgatgctgccgccaaggccaacctgaatgctcacatc
gaccatatcaagcaggtgggtcgtctcattcaccaactgagcctgccggaaggcaccgaa
aacggtcacttcgtggcgccaactgcggtggaaatcgattccatcaaggtactgaccaaa
gaaaacttcggtcctatcctgcacgtggtgcgctacaaggccgccggcctgcagaaggtt
atcgatgacatcaactctaccggcttcggtctgactctgggtatccacagccgtaacgag
ggccatgccctggaagtggccgacaaggtaaacgtgggtaacgtgtatatcaaccgtaac
caaatcggcgccgtggtgggtgtgcagccattcggtggccagggcctgtccggcactggt
ccaaaagccggtggtccacactacctgacgcgctttgtaaccgagaagacccgcaccaac
aacatcaccgccatcggtggtaatgcgaccctgctgtctctgggcgacgccgactga

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