Capillimicrobium parvum: DSM104329_05202
Help
Entry
DSM104329_05202 CDS
T08390
Symbol
shc
Name
(GenBank) Squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00909
Sesquiterpenoid and triterpenoid biosynthesis
sbae01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DSM104329_05202 (shc)
Enzymes [BR:
sbae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
DSM104329_05202 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
DSM104329_05202 (shc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-ProteinID:
UGS38772
UniProt:
A0A9E7C6E1
LinkDB
All DBs
Position
5359276..5361180
Genome browser
AA seq
634 aa
AA seq
DB search
MPVGPELPSAVSPRPASPPDAREALARGVAFLRAQQAPDGWWKAPLDTNVTMDAEDLLMR
EFLGVRTERETAAAARWIRSQQRPDGTWATFHGGPGDLSTTAEAWVALRLAGDPADAAHM
REAAAFVLDGGGLEASRVFTRIWLALFGLWSWDDVPAMVPEAVLLPKWFPLNLYDFACWA
RQTIAPLTIVGAYRPQRPLPVGVDELRRGGPIQPPRRSLRDWPGRLGWLDHLLHRYERHP
VGPLRRMALDRAERWIVARQEADGSWGGIQPPWVYSLMALSVRGYPNDHPVMRAGLAGLD
TFIIEEGDQRRLEACQSPVWDTALAMIALADAGVPPDDEDLARAARWTLAEEVRVRGDWA
VRRPALEPGGWAFEFANDNYPDIDDTAEVVLALRRTRLGEAGADAEPAIRRGIDWAIGMQ
SNDGGWGAFDADNTRELCVQLPFCDFGAVIDPPSADVTAHVVEMLALEGRASDPAAQRGI
RWLLDAQEADGSWFGRWGINHVYGTGAVVPALVAAGIPAGDPAIRRAVDWLGAHQNADGG
WGEDARSYVDPAWIGRGQSTASQTAWALLALEAAGERDGDAVARGVAWLAASQRPDGGWD
EPQFTGTGFPGDFYINYGLYRQVFPLMALGRCLR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgccggtcggtccagaacttccgagcgccgtctccccccgccccgcttcaccgccagac
gcccgtgaggcgctggcccgcggggtcgcgttcctgcgcgcgcaacaggcgccggacggc
tggtggaaggcgccgctggacacgaacgtgacgatggacgccgaggacctcctcatgcgc
gagttcctcggcgtgcgcaccgagcgcgagaccgcggcggcggcccgctggatccgctcg
cagcagcgccccgacgggacgtgggcgacgttccacggcgggccgggcgacctctcgacg
accgccgaggcgtgggtcgccctgcgcctggcgggcgaccccgcggacgcggcgcacatg
cgcgaggcggcggcgttcgtcctcgacggcggcggtctcgaggcgtcccgcgtcttcacc
cggatctggctggcgctcttcgggctgtggtcctgggacgacgtgccggcgatggtgccc
gaggcggtcctgctgccgaagtggttcccgctgaacctctacgacttcgcctgctgggcg
cgccagacgatcgcgccgctgacgatcgtcggcgcgtaccggccgcagcgcccgctgccc
gtcggcgtcgacgagctgcgccgcggcggtcccatccagccgccccgaaggtcgctgcgc
gactggcccgggcgcctcggctggctcgaccacctcctgcaccgctacgagcgccacccg
gtcggcccgctgcggcgcatggccctcgaccgcgcggagcgctggatcgtggcccgccag
gaggccgacggctcatggggcgggatccagccgccgtgggtgtactcgctcatggcgctc
agcgtgcgcggctatccgaacgaccatccggtgatgcgcgccggcctggccggcctcgac
acgttcatcatcgaggagggcgaccagcgccgcctcgaggcgtgccagtcgcccgtctgg
gacaccgcgctggcgatgatcgcgctggccgatgccggcgtgccgcccgacgacgaggac
ctcgcgcgcgcggcgcgctggaccctcgccgaggaggtccgcgtgcgcggcgactgggcc
gtgcgccgccctgcgctcgagccgggcggctgggccttcgagttcgccaacgacaactac
ccggacatcgacgacacggccgaggtcgtgctcgccctgcggcgcacgcgcctcggcgag
gccggcgccgacgccgagcccgccatccggcgcggcatcgactgggcgatcgggatgcag
tccaacgacggcggctggggcgcgttcgacgccgacaacacccgcgagctgtgcgtccag
ctgccgttctgcgacttcggggcggtcatcgacccgccgtccgcggacgtcaccgcccac
gtggtcgagatgctcgcgctcgaggggcgcgcgagcgatcccgccgcccagcgcggcatc
cgctggctgctcgacgcccaggaagccgacggctcctggttcggccgctggggcatcaac
cacgtctacggcacgggcgcggtcgtcccagcgctcgtcgcggcgggcatcccggcgggc
gatccggccatccggcgcgccgtcgactggctcggcgcccaccagaacgccgacggcggc
tggggcgaggacgcccgctcctacgtcgacccggcgtggatcggccgcggccagagcacc
gcctcgcagacggcgtgggcgctcctggcgctcgaggcggccggcgagcgcgacggcgac
gcggtcgcgcgcggcgtggcctggctggccgcgtcccagcgccccgacggcggctgggac
gagccacagttcaccggcaccggcttcccgggcgacttctacatcaactacggcctgtac
cggcaggtgttcccgctcatggcgctgggccgatgcctgcggtga
DBGET
integrated database retrieval system
