Sphingobacterium bambusae: SCB77_11425
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Entry
SCB77_11425 CDS
T09645
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbam03009
]
SCB77_11425 (rimO)
Enzymes [BR:
sbam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SCB77_11425 (rimO)
Ribosome biogenesis [BR:
sbam03009
]
Prokaryotic type
ribosomal protein modification factors
SCB77_11425 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WPL51058
LinkDB
All DBs
Position
complement(2748237..2749571)
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AA seq
444 aa
AA seq
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MKTKYAKTASPVSKPRVNVVTLGCSKNIHDSEVLMGQLKGNQMEVVHEASNIRANDIVVI
NTCGFIDNAKQESIDTILHYSELKDQGKVNKVIVTGCLSERYKPELQAEIPNIDAFFGTN
DLPELLSTIGADYRHELLGERLLTTPSHFSYFKIAEGCNRPCSFCAIPLMRGKHVSKSIE
DLVKEAKFLAANGTKELILIAQDLTYYGLDIYGKRNLSDLMRHLSDVDGIEWIRLQYAYP
SGFPMDILDAMNERSNICNYLDMPLQHISDSMLKSMRRGTTKQKQVDLVNQIRDKVPDIA
LRTTLICGYPGETERDYQEMLEWVEETRFDRLGCFTYSHEEKTHAYDLVDDVPEGVKEAR
VEEIMEVQQGISFEKNQDKVGQTYKVLIDRVDGDYFIGRTEYDSPEVDNEVVLNAKDNYA
RIGDFVQVTIDRAEDFDLYGTIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaatatgcaaagacagcttccccggttagcaaaccgcgggtgaatgtcgtc
acattgggttgctccaaaaatattcatgactcggaagtattgatgggccagctgaagggc
aaccaaatggaggtcgtgcacgaggctagcaacatccgtgcaaatgatatcgtcgtgatc
aatacctgcggttttatcgataatgccaaacaggaatctatcgatactatcctgcactat
tctgagttgaaagatcaaggtaaggtaaacaaggttatcgttacgggttgcctttcggag
cggtacaagcccgaattgcaggccgagattccgaacatagatgcctttttcggtaccaac
gaccttccggagttgttatcgactatcggtgctgattatcgccatgaactgcttggcgag
cgtttattgactacgccatcacatttttcgtattttaaaattgccgagggctgtaaccgt
ccttgttcattctgtgctattccgttgatgcgcggtaaacacgtctccaaatcgatcgaa
gatttggtgaaggaggctaaattcttggcggccaacggcacgaaggaattaattcttatt
gcgcaggatctaacttactacggcttggatatttacggcaaacgtaacctttccgacctg
atgcgccacctttctgatgtcgatggtatcgagtggattcgtttgcaatatgcttatcca
tcgggtttccctatggatatactggatgcgatgaacgagcgttctaatatctgcaattac
ctcgatatgcccttacagcatatcagtgacagtatgttgaaatctatgcgccgcggaacc
accaagcaaaagcaggtcgatttggtcaaccaaatccgtgataaggttcctgatatagcc
ttgcgtactacactaatctgtggttaccccggcgaaaccgagcgggattatcaggagatg
ttggaatgggtagaggaaacgcgattcgatcgtctgggctgtttcacttactcacatgag
gaaaaaacccatgcttatgatttggttgacgatgtgccagaaggggtgaaagaagctcgc
gtagaagagattatggaggtacaacagggcatttctttcgaaaagaatcaagataaagtt
ggtcaaacctataaagtgttgatcgaccgtgtggacggcgattattttatcggacgcacc
gaatacgattcgccggaagtggataacgaagtggtgttaaatgccaaggataactacgcc
cgcatcggcgactttgtacaagtaacgatcgatcgcgccgaagactttgatctttacgga
acgattgttaaataa
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