Sphingobium baderi: ATN00_19750
Help
Entry
ATN00_19750 CDS
T04194
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbd
Sphingobium baderi
Pathway
sbd03030
DNA replication
sbd03410
Base excision repair
sbd03420
Nucleotide excision repair
sbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATN00_19750
03410 Base excision repair
ATN00_19750
03420 Nucleotide excision repair
ATN00_19750
03440 Homologous recombination
ATN00_19750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbd03032
]
ATN00_19750
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_19750
Enzymes [BR:
sbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATN00_19750
DNA replication proteins [BR:
sbd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ATN00_19750
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ATN00_19750
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATN00_19750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DprA_N
HHH_5
HAMP_N3
HHH_2
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ALR22213
UniProt:
A0A0S3F3F3
LinkDB
All DBs
Position
4044530..4047316
Genome browser
AA seq
928 aa
AA seq
DB search
MSQNHLYLVDGSGYIFRAYHQLPPLTNQHGQPVGAVYGYTTMLWKLATELGNTDGPTHLA
VVLDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
TYTKAAIAQGWKVTIVSSDKDLMQLIQPDVDMYDTMKNERRGADYVMGKFGVQPEQLGDV
LALMGDSVDNVPGVPGIGPKTAAKLITEYGSLEAALKAAPSMKKSKMQENLIAHADMARL
SRKLVALHDSMDLPEPLEDLTLKGIPPEPLQAFLSHHGFKSLLARLGAPAAAVAVAATSA
AVSESTPPLAPQAEEEPPIDRSLYETVVTEEALERWIAEAHAEGVVAVDTETDMLDCVSC
ALVGVSLAIGPSKACYIPVGHGGKDMFAERPEQLPLALVLAKIKPLLEDDSVLKVGQNLK
YDITILRRHGIEIAPYDDTIVMSFDLDAGQSLAGHGMDEAAKTHLNHSCISFKDVAGTGK
KQISFAEVPLDRATEYAAEDADVTLRLWKLFKARIANEGATRIYELVDRPLVPVIAKMEH
EGIKVDREALSRLSAEFTAGIAALETEIHALAGQPFAIGSTQQLGAILFDKLGYKGGRKG
KSGAYSTDANILEQLKAQGAEIAGKVLDWRQLSKLKSTYTDALQAQINKDSARVHTSYSL
SGAQTGRLSSTDPNLQNIPIRTEVGRQIRHAFVAEPGNVILAADYSQIELRLAAHMADVP
ALKQAFADGEDIHAATAEQLFGEVNRDTRARAKTINFAILYGISRWGLAARLEITADEAQ
DMISRYYERFPGINIYINETIEKARERGYTETLFGRKTWFPRIRASIQHERQGAERAAIN
APIQGTSADIIKRAMARMGPALAAEGLDQVRMLLQVHDELVFELPQSDVERASPVIRRVM
EGAAEPLVKLSVPLGVEIGHGPSWGAAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaatcatctctatctggtggacggcagcggctatatcttccgcgcctatcac
cagcttccgccgctcaccaaccaacatggccagccggtgggcgcggtctatggctatacg
acgatgctctggaagctggcgacggagctgggcaatacggacggccccacgcatctggcc
gtggtgctggacaagggcagccacactttccgcaacgacatgtatgaccagtataaggcg
aaccgcccgcctgcgccggaagatctggttccccagttcccaatgatccgcgatgcgacc
cgcgccttctccctcccctgcatcgaagaagcgggtttcgaagccgacgatatcatcgca
acatatacaaaggccgccatcgcgcagggctggaaagtcaccatcgtcagttccgacaag
gatttgatgcagctcatccagcccgacgtcgacatgtatgacaccatgaagaacgaaagg
cgcggcgcggactatgtgatgggcaagttcggcgtccagcccgagcagctgggcgatgtc
cttgcgctgatgggtgacagcgtcgacaatgttccgggcgtgccgggcatcggtcccaag
acggcggcgaagctcatcaccgaatatggctcacttgaagccgcgctcaaagccgcgccg
tcgatgaaaaaatcgaagatgcaggaaaacctcatcgcccatgccgatatggcgcgccta
tcgcgcaagctggtggcgctgcacgacagcatggacctgccggaaccgctggaggatctg
acgctcaagggtatcccgcctgaacccttgcaggcattcctgtcccaccacggcttcaaa
tcgctgctggcccgccttggtgcgcccgctgcagcggtggcggtcgcggccacctctgct
gccgtcagcgaaagcacgccaccgctcgctcctcaagcggaggaagaaccgcccattgac
cgtagcctctacgaaaccgtggtgacggaagaagcactcgaacgctggatcgctgaagcc
catgcggaaggcgttgtggcggtcgacaccgaaaccgacatgctcgactgcgtgtcctgc
gctctggtgggcgtgagcctcgccatcggccccagcaaagcctgctacatcccggtcggc
cacggcgggaaggacatgttcgccgaacgtcccgaacagttgccgcttgcccttgtcctt
gccaagatcaagcctctgctggaggacgatagcgtccttaaggtcggccaaaacctcaaa
tatgacatcaccatcctgcgccgccacggcattgagatcgcgccctatgacgacaccatc
gtcatgagctttgacctcgacgcagggcagagcctcgccgggcatggcatggacgaggca
gccaagacccacctcaaccacagttgcatcagcttcaaggatgtggcgggaacgggcaag
aagcagatcagcttcgccgaagtaccgctcgacagggcaaccgaatatgccgccgaggat
gccgacgtcacgctgcgcctgtggaaactgttcaaggcgcgcatcgcgaacgaaggcgcg
acccgcatctacgaactggtcgaccgcccgctcgtcccggtcatcgcgaagatggagcat
gaagggatcaaggtggaccgcgaggcgctgtcccgcctgtccgccgagttcaccgctggc
atcgcggcgctggaaacggaaatccacgcgctcgccggccagcccttcgccatcggttcg
acgcagcagctgggcgcgatcctgttcgacaagctgggctataagggtgggcgcaagggc
aagtccggcgcctattccaccgacgccaacattctcgaacaattgaaggcccagggcgcg
gagatcgcgggcaaggtgctcgactggcgtcagctctccaagctaaaatccacctatacc
gatgcgctgcaagcccagatcaacaaggattcagcccgcgtccacaccagctattcgctc
tcgggcgcgcagacgggccgtctgtcgtccaccgatccgaacctgcaaaatatccccatc
cgcaccgaagtcggccgccagatacgccatgccttcgtcgcggaaccgggcaatgtcatc
ctcgcggcggactacagccagatcgaactgcgcctcgccgcgcacatggcggacgtgccg
gcgctcaagcaagccttcgcagatggcgaggacatccacgccgccacggcggaacagctt
tttggggaggtaaaccgcgacacccgcgcccgcgccaaaacgatcaacttcgcgatcctg
tatggcatttcccgctggggcctggctgcacggctggagatcacggcggacgaggcgcag
gacatgatctcccgctattatgagcgcttccccggcatcaacatctacatcaacgagacg
atagagaaggcacgcgagcgcggctacaccgaaaccctcttcggccggaagacatggttc
ccccgcatccgggcatccatccagcatgaacggcagggcgcggagcgggccgcaatcaac
gccccgatccagggcaccagcgccgacatcatcaagcgcgccatggcccgcatgggcccg
gcgctggccgccgagggactggatcaggtaaggatgctgctacaggtccatgacgaactg
gtgtttgaattgccgcaaagcgatgtggagcgcgccagccccgtcatccgccgcgtcatg
gaaggcgcagccgaacctctggtgaagctctccgtcccgctgggcgtcgaaatcggccac
ggccctagctggggcgcagcgcactaa
DBGET
integrated database retrieval system