KEGG   Sphingobium baderi: ATN00_19750
Entry
ATN00_19750       CDS       T04194                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sbd  Sphingobium baderi
Pathway
sbd03030  DNA replication
sbd03410  Base excision repair
sbd03420  Nucleotide excision repair
sbd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ATN00_19750
   03410 Base excision repair
    ATN00_19750
   03420 Nucleotide excision repair
    ATN00_19750
   03440 Homologous recombination
    ATN00_19750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbd03032]
    ATN00_19750
   03400 DNA repair and recombination proteins [BR:sbd03400]
    ATN00_19750
Enzymes [BR:sbd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ATN00_19750
DNA replication proteins [BR:sbd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ATN00_19750
DNA repair and recombination proteins [BR:sbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ATN00_19750
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATN00_19750
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DprA_N HHH_5 HAMP_N3 HHH_2 HHH IMS_HHH
Other DBs
NCBI-ProteinID: ALR22213
UniProt: A0A0S3F3F3
LinkDB
Position
4044530..4047316
AA seq 928 aa
MSQNHLYLVDGSGYIFRAYHQLPPLTNQHGQPVGAVYGYTTMLWKLATELGNTDGPTHLA
VVLDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
TYTKAAIAQGWKVTIVSSDKDLMQLIQPDVDMYDTMKNERRGADYVMGKFGVQPEQLGDV
LALMGDSVDNVPGVPGIGPKTAAKLITEYGSLEAALKAAPSMKKSKMQENLIAHADMARL
SRKLVALHDSMDLPEPLEDLTLKGIPPEPLQAFLSHHGFKSLLARLGAPAAAVAVAATSA
AVSESTPPLAPQAEEEPPIDRSLYETVVTEEALERWIAEAHAEGVVAVDTETDMLDCVSC
ALVGVSLAIGPSKACYIPVGHGGKDMFAERPEQLPLALVLAKIKPLLEDDSVLKVGQNLK
YDITILRRHGIEIAPYDDTIVMSFDLDAGQSLAGHGMDEAAKTHLNHSCISFKDVAGTGK
KQISFAEVPLDRATEYAAEDADVTLRLWKLFKARIANEGATRIYELVDRPLVPVIAKMEH
EGIKVDREALSRLSAEFTAGIAALETEIHALAGQPFAIGSTQQLGAILFDKLGYKGGRKG
KSGAYSTDANILEQLKAQGAEIAGKVLDWRQLSKLKSTYTDALQAQINKDSARVHTSYSL
SGAQTGRLSSTDPNLQNIPIRTEVGRQIRHAFVAEPGNVILAADYSQIELRLAAHMADVP
ALKQAFADGEDIHAATAEQLFGEVNRDTRARAKTINFAILYGISRWGLAARLEITADEAQ
DMISRYYERFPGINIYINETIEKARERGYTETLFGRKTWFPRIRASIQHERQGAERAAIN
APIQGTSADIIKRAMARMGPALAAEGLDQVRMLLQVHDELVFELPQSDVERASPVIRRVM
EGAAEPLVKLSVPLGVEIGHGPSWGAAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtctcagaatcatctctatctggtggacggcagcggctatatcttccgcgcctatcac
cagcttccgccgctcaccaaccaacatggccagccggtgggcgcggtctatggctatacg
acgatgctctggaagctggcgacggagctgggcaatacggacggccccacgcatctggcc
gtggtgctggacaagggcagccacactttccgcaacgacatgtatgaccagtataaggcg
aaccgcccgcctgcgccggaagatctggttccccagttcccaatgatccgcgatgcgacc
cgcgccttctccctcccctgcatcgaagaagcgggtttcgaagccgacgatatcatcgca
acatatacaaaggccgccatcgcgcagggctggaaagtcaccatcgtcagttccgacaag
gatttgatgcagctcatccagcccgacgtcgacatgtatgacaccatgaagaacgaaagg
cgcggcgcggactatgtgatgggcaagttcggcgtccagcccgagcagctgggcgatgtc
cttgcgctgatgggtgacagcgtcgacaatgttccgggcgtgccgggcatcggtcccaag
acggcggcgaagctcatcaccgaatatggctcacttgaagccgcgctcaaagccgcgccg
tcgatgaaaaaatcgaagatgcaggaaaacctcatcgcccatgccgatatggcgcgccta
tcgcgcaagctggtggcgctgcacgacagcatggacctgccggaaccgctggaggatctg
acgctcaagggtatcccgcctgaacccttgcaggcattcctgtcccaccacggcttcaaa
tcgctgctggcccgccttggtgcgcccgctgcagcggtggcggtcgcggccacctctgct
gccgtcagcgaaagcacgccaccgctcgctcctcaagcggaggaagaaccgcccattgac
cgtagcctctacgaaaccgtggtgacggaagaagcactcgaacgctggatcgctgaagcc
catgcggaaggcgttgtggcggtcgacaccgaaaccgacatgctcgactgcgtgtcctgc
gctctggtgggcgtgagcctcgccatcggccccagcaaagcctgctacatcccggtcggc
cacggcgggaaggacatgttcgccgaacgtcccgaacagttgccgcttgcccttgtcctt
gccaagatcaagcctctgctggaggacgatagcgtccttaaggtcggccaaaacctcaaa
tatgacatcaccatcctgcgccgccacggcattgagatcgcgccctatgacgacaccatc
gtcatgagctttgacctcgacgcagggcagagcctcgccgggcatggcatggacgaggca
gccaagacccacctcaaccacagttgcatcagcttcaaggatgtggcgggaacgggcaag
aagcagatcagcttcgccgaagtaccgctcgacagggcaaccgaatatgccgccgaggat
gccgacgtcacgctgcgcctgtggaaactgttcaaggcgcgcatcgcgaacgaaggcgcg
acccgcatctacgaactggtcgaccgcccgctcgtcccggtcatcgcgaagatggagcat
gaagggatcaaggtggaccgcgaggcgctgtcccgcctgtccgccgagttcaccgctggc
atcgcggcgctggaaacggaaatccacgcgctcgccggccagcccttcgccatcggttcg
acgcagcagctgggcgcgatcctgttcgacaagctgggctataagggtgggcgcaagggc
aagtccggcgcctattccaccgacgccaacattctcgaacaattgaaggcccagggcgcg
gagatcgcgggcaaggtgctcgactggcgtcagctctccaagctaaaatccacctatacc
gatgcgctgcaagcccagatcaacaaggattcagcccgcgtccacaccagctattcgctc
tcgggcgcgcagacgggccgtctgtcgtccaccgatccgaacctgcaaaatatccccatc
cgcaccgaagtcggccgccagatacgccatgccttcgtcgcggaaccgggcaatgtcatc
ctcgcggcggactacagccagatcgaactgcgcctcgccgcgcacatggcggacgtgccg
gcgctcaagcaagccttcgcagatggcgaggacatccacgccgccacggcggaacagctt
tttggggaggtaaaccgcgacacccgcgcccgcgccaaaacgatcaacttcgcgatcctg
tatggcatttcccgctggggcctggctgcacggctggagatcacggcggacgaggcgcag
gacatgatctcccgctattatgagcgcttccccggcatcaacatctacatcaacgagacg
atagagaaggcacgcgagcgcggctacaccgaaaccctcttcggccggaagacatggttc
ccccgcatccgggcatccatccagcatgaacggcagggcgcggagcgggccgcaatcaac
gccccgatccagggcaccagcgccgacatcatcaagcgcgccatggcccgcatgggcccg
gcgctggccgccgagggactggatcaggtaaggatgctgctacaggtccatgacgaactg
gtgtttgaattgccgcaaagcgatgtggagcgcgccagccccgtcatccgccgcgtcatg
gaaggcgcagccgaacctctggtgaagctctccgtcccgctgggcgtcgaaatcggccac
ggccctagctggggcgcagcgcactaa

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