Sorghum bicolor (sorghum): 8054828
Help
Entry
8054828 CDS
T01086
Name
(RefSeq) ABC transporter B family member 1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8054828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8054828
04147 Exosome [BR:
sbi04147
]
8054828
04090 CD molecules [BR:
sbi04090
]
8054828
Enzymes [BR:
sbi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8054828
Transporters [BR:
sbi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8054828
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8054828
CD molecules [BR:
sbi04090
]
Proteins
8054828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_25
AAA_5
APS_kinase
AAA_30
nSTAND1
SbcC_Walker_B
AAA_15
DUF815
DUF87
Rad17
DUF6264
Motif
Other DBs
NCBI-GeneID:
8054828
NCBI-ProteinID:
XP_021320743
LinkDB
All DBs
Position
7:complement(59822089..59830560)
Genome browser
AA seq
1389 aa
AA seq
DB search
MSTNDPDEIRARVVVLGAPHADDDAGDEWARPELEAFHLPSPAHQPPGFHLAAGHQPEAA
AEQPTTLPAARRTSDTSTAAGAAPPSPSPPPPPAPLEMDQPPNAKPASSSAAAAGANDNK
KPTPPAALRDLFRFADGLDCALMLVGTLGALVHGCSLPVFLRFFADLVDSFGSHANDPDT
MVRLVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLDAALRQDVSFFDTD
VRASDVIYAINADAVVVQDAISEKLGNLIHYMATFVAGFVVGFTAAWQLALVTLAVVPLI
AVIGGLSAAALAKLSSRSQDALSGASGIAEQALAQIRIVQAFVGEEREMRAYSAALAVAQ
KIGYRSGFAKGLGLGGTYFTVFCCYGLLLWYGGHLVRGNHTNGGLAIATMFSVMIGGLAL
GQSAPSMAAFAKARVAAAKIFRIIDHRPGISSRDGEDGGGVELESVTGRVEMRGVDFAYP
SRPDVPILRGFSLSVPAGKTIALVGSSGSGKSTVVSLLERFYDPSAGQILLDGHDLKSLK
LRWLRQQIGLVSQEPTLFATSIKENLLLGRDSQSATQAEMEEAARVANAHSFIVKLPDGY
DTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGR
TTLVIAHRLSTIRKADVVAVLQGGAVSEMGTHDELMAKGENGTYAKLIRMQEQAHEAALV
NARRSSARPSSARNSVSSPIMTRNSSYGRSPYSRRLSDFSTSDFTLSIHDPHHHHRTMAD
KQLAFRAGASSFLRLARMNSPEWAYALVGSLGSMVCGSFSAIFAYILSAVLSVYYAPDPR
YMKREIAKYCYLLIGMSSAALLFNTVQHVFWDTVGENLTKRVREKMFAAVLRNEIAWFDA
DENASARVAARLALDAQNVRSAIGDRISVIVQNSALMLVACTAGFVLQWRLALVLLAVFP
LVVGATVLQKMFMKGFSGDLEAAHARATQIAGEAVANLRTVAAFNAERKITGLFEANLRG
PLRRCFWKGQIAGSGYGVAQFLLYASYALGLWYAAWLVKHGVSDFSRTIRVFMVLMVSAN
GAAETLTLAPDFVKGGRAMRSVFETIDRKTEVEPDDVDAAPVPERPKGEVELKHVDFSYP
SRPDIQVFRDLSLRARAGKTLALVGPSGCGKSSVLALVQRFYEPTSGRVLLDGKDVRKYN
LRALRRVVAVVPQEPFLFAASIHDNIAYGREGATEAEVVEAATQANAHRFISALPEGYGT
QVGERGVQLSGGQRQRIAIARALVKQAAIMLLDEATSALDAESERCVQEALERAGNGRTT
IVVAHRLATVRNAHTIAVIDDGKVVEQGSHSHLLKHHPDGCYARMLQLQRLTGGAAPGPP
PSSSNGAAA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaacgacccggacgagatcagggcgcgcgtcgtcgtcctcggcgcccctcat
gccgacgacgacgccggcgacgagtgggcccgccccgagctcgaggccttccacctcccc
tctcccgcccaccagcctcctggcttccacctagccgctgggcaccaaccggaagctgca
gcagagcaacccaccacgctccctgctgcccgccgcaccagcgacacatccactgctgct
ggtgctgctcctccttctccttcgccgcctccgccgccggctcctttggagatggaccag
ccgcccaatgccaagccggcctcctcctccgccgccgccgccggcgccaatgacaacaag
aagcccaccccgcccgccgcgctgcgcgacctcttccgcttcgccgacggcctcgactgc
gcgctcatgctcgtcggcacgctcggcgcgctcgtccacggctgctcgctccccgtcttc
ctccgcttcttcgccgacctcgtcgactccttcggctcccacgccaacgacccggacacc
atggtccgcctcgtcgtcaagtacgccttctacttcctcgtcgtcggagccgcaatctgg
gcgtcctcatgggcagagatctcctgctggatgtggaccggcgagcggcagtcgacgcgg
atgcggatccggtacctggacgcggcgctgcggcaggacgtgtccttcttcgacaccgac
gtgcgcgcctcggacgtcatctacgccatcaacgcggacgccgtggtggtgcaggacgcc
atcagcgagaagctgggcaacctcatccactacatggccaccttcgtggcgggcttcgtc
gtgggcttcaccgccgcctggcagctggcgctcgtcacgctcgccgtcgtgccgctcatc
gccgtcatcggggggctcagcgccgccgcgctcgccaagctctcctccaggagccaggac
gcgctgtcgggcgccagcggcatcgcggagcaggcgctcgcgcagatacggatcgtgcag
gccttcgtcggcgaggagcgcgaaatgcgggcgtactcggcggcgctggccgtcgcgcag
aagatcggctaccgcagcggcttcgccaaggggctcggcctcggcggcacctacttcacc
gtcttctgctgctacggcctcctgctctggtacggcggacacctcgtccgcggcaaccac
accaacggagggctcgccatcgccaccatgttctccgtcatgatcggcgggctggccctc
gggcagtcggcgccgagcatggccgcgttcgccaaggcgcgcgtggcggccgccaagatc
ttccgcatcatcgaccacaggccgggcatctcctcgcgggacggcgaggacggcggcggc
gtggagctggagtcggtgacggggcgggtggagatgaggggcgtggacttcgcgtacccg
tcgcggccggacgtccccatcctgcgcggcttctcgctcagcgtgcccgccggcaagacc
atcgcgctggtgggcagctccggctccgggaagagcacggtggtgtcgctcctcgagagg
ttctacgaccccagcgcagggcaaatcttgctggacgggcatgatctcaagtcgctgaag
ctccggtggctccggcagcagattggtctggtgagccaggagccgacgctgttcgcgacg
agcatcaaggagaacctgctgctggggcgggacagtcagagtgcgacgcaggccgagatg
gaggaggccgccagggtggccaacgcgcactccttcatcgtcaagctccccgacggctac
gacacgcaggttggggagcgcggcctgcagctctccggcgggcagaagcagcgcatcgcc
atcgcccgcgccatgctcaagaaccctgccatcctgctgctggacgaggctaccagcgcg
ctcgactccgagtcggagaagctcgtgcaggaggcgctggaccgcttcatgatcgggcgc
accaccctggtgatcgcgcacaggctgtccaccatccgcaaggccgacgtcgtggccgtg
ctgcagggcggcgccgtctccgagatgggcacccacgacgagctcatggccaagggcgag
aacggcacctacgccaagctgatccgcatgcaggagcaggcgcacgaggcggcgctcgtc
aacgcccgccgcagcagcgccaggccctccagcgcccgcaactccgtcagctcgcccatc
atgacgcgcaactcctcctacggccgctccccctactcccgccgcctctccgacttctcc
acctccgacttcaccctctccatccacgacccgcaccaccaccaccggacgatggccgac
aagcagctcgcgttccgcgccggcgccagctccttcctccgcctcgccaggatgaactcg
cccgagtgggcctacgcgctcgtcggctccctgggctccatggtctgcggctccttcagc
gccatcttcgcctacatcctcagcgccgtgctcagcgtctactacgcgccggaccctcgc
tacatgaagcgcgagatcgccaagtactgctacctgctcatcggcatgtcctccgcggcg
ctgctgttcaacacggtgcagcacgtgttctgggacacggtcggcgagaacctcacgaag
cgtgtgcgcgagaagatgttcgccgccgtgctccgcaacgagatcgcctggttcgacgcc
gacgagaacgccagcgcgcgcgtcgccgccaggctcgcgctcgacgcccagaacgtgcgc
tccgccatcggggaccgtatctccgtcatcgtccagaactcggcgctcatgctcgtcgcc
tgcaccgcgggcttcgtcctccagtggcgcctcgcgctcgtgctcctcgccgtcttcccg
ctcgtcgtcggcgccaccgtcctgcagaagatgttcatgaagggcttctcgggggacctg
gaggccgcgcacgccagggccacgcagatcgcgggcgaggccgtcgccaacctgcgcacc
gtggcggcgttcaacgcggagcgcaagatcacggggctcttcgaggccaaccttcgcggc
ccgctccggcgctgcttctggaaggggcagatcgccgggagcggctacggcgtggcgcag
ttcctgctgtacgcgtcctacgcgctggggctctggtacgccgcgtggctagtgaagcac
ggcgtctccgacttctcgcgcaccatccgcgtgttcatggtgctcatggtgtccgccaac
ggcgccgccgagacgctgacgctggcgccggactttgtcaagggcgggcgcgcgatgcgg
tccgtgttcgagaccatcgaccggaaaacggaggtggagcccgacgacgtggacgcggcg
ccggtgccggagcggcccaagggcgaggtggagctgaagcacgtggacttctcgtacccg
tcgcggccggacatccaggtgttccgcgacctgagcctccgggcgcgcgccgggaagacg
ctggcgctggtgggtccgagcgggtgcggcaagagctcggtgctggcgctggtgcagcgg
ttctacgagcccacgtccgggcgcgtgctcctggacggcaaggacgtgcgcaagtacaac
ctgcgggcgctgcggcgcgtggtggcggtggtgccgcaggagccgttcctgttcgcggcg
agcatccacgacaacatcgcgtacgggcgcgagggcgcgacggaggcggaggtggtggag
gcggcgacgcaggcgaacgcgcaccggttcatctcggcgctgccggagggctacgggacg
caggtgggcgagcgcggggtgcagctgtcgggcgggcagcggcagcggatcgcgatcgcg
cgcgcgctggtgaagcaggcggccatcatgctgctggacgaggcgaccagcgcgctggac
gccgagtcggagcggtgcgtgcaggaggcgctggagcgcgccgggaacggccgcaccacc
atcgtggtggcgcaccggctggccacggtgcggaacgcgcacaccatcgccgtgatcgac
gacggcaaggtggtggagcaagggtcgcactcgcacctgctcaagcaccatcccgacggg
tgctacgcgcggatgctgcagctgcagcggctgacaggcggtgccgcgcccgggccgccg
ccgtcgtcgtccaacggggccgccgcgtag
DBGET
integrated database retrieval system
