Sorghum bicolor (sorghum): 8054990
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Entry
8054990 CDS
T01086
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00330
Arginine and proline metabolism
sbi00480
Glutathione metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi04148
Efferocytosis
Module
sbi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
8054990
09106 Metabolism of other amino acids
00480 Glutathione metabolism
8054990
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
8054990
Enzymes [BR:
sbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
8054990
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
8054990
NCBI-ProteinID:
XP_002462765
UniProt:
C5X6Y9
A0A921UV90
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All DBs
Position
2:complement(66401755..66403568)
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AA seq
413 aa
AA seq
DB search
MVGSSPVQAVLAAPGVRDRKVLAFKSDAHKGNKQDVASGLVHSILASTSPPQRSAFYVLD
LAKVVDLFRAWRRALPDARPCYAVKCNPDPALLGALAALGAGFDCASRAEIEAVLALGVQ
PRDIVYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRRCHPACELLLRLKGPDGGGVR
VDLGTKYGAHADEVVPLLRAAQRAGVGVAGVSFHVGSGASILAVYSGAIQAARAAFDAAA
ALGMPPMRVLDIGGGFVSGPTFDDAAAVINDALAQHFGDLPCVEVIGEPGRYFAETAFTL
AARVIGKRTRGEVREYWIDDGLYGSLNCVIMDHYVPTPRPLASPRPGDKTYTSTVFGPTC
DSFDTVVTGYQLPEMSVGDWLVFDDMGAYTTGAGSNFNGYATSDIKIYVAYSS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggttggaagcagccccgtgcaggccgtgctggcggcgcccggcgtcagggacaggaag
gtgctcgcgttcaaaagcgacgcccacaagggcaacaagcaggacgtcgcgtccggcctc
gtccactccatcctcgcctccaccagcccgccccagcgcagcgccttctacgtcctcgac
ctcgccaaggtcgtcgacctcttccgcgcgtggcgccgggcgctccccgacgcgcggccc
tgctacgccgtcaagtgcaacccggacccggcgctcctgggcgcgctcgccgcgctcggc
gcgggcttcgactgcgccagccgcgccgagatcgaggccgtgctcgcgctcggcgtccag
ccccgggacatcgtctacgccaacccctgcaagcccgaggcgcacctcgagtacgccgcg
gaggtcggcgtcaacctcaccacctacgactccgaggaggaggtggccaaggtcaggcgc
tgccacccggcctgcgagctcctgctccgcctcaagggccccgacggcggcggcgtcagg
gtcgacctgggcaccaagtacggcgcgcacgccgacgaggtcgtgccgctcctgcgcgcc
gcgcagcgcgcgggggtcggcgtggccggcgtctccttccacgtcggcagcggcgcgtcc
atcctcgccgtgtacagcggggccatccaggccgcgcgcgccgcgttcgacgccgccgcc
gccctggggatgccgcccatgcgcgtcctcgacatcggcggcgggttcgtgtccggcccc
actttcgacgacgcggcggcggtgatcaacgacgcgctcgcgcagcacttcggcgacctg
ccgtgcgtggaggtgatcggcgagcccgggcggtacttcgccgagacggccttcacgctc
gccgcgcgcgtcatcgggaagcgcacgcgtggagaggtgcgcgagtactggatcgacgac
ggcctctacggctcgctcaactgcgtcatcatggaccactacgtgccgacaccgaggccg
ctagccagcccgcgccccggcgacaaaacctacacttccacggtgttcggaccaacgtgc
gactctttcgacacggtggtgaccgggtaccagctgccagagatgagcgtgggcgactgg
ctcgtcttcgacgacatgggcgcctacaccaccggagccggctccaacttcaacggctac
gcgacgtcagacataaagatctacgtagcctactccagctga
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