Sorghum bicolor (sorghum): 8055409
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Entry
8055409 CDS
T01086
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00130
Ubiquinone and other terpenoid-quinone biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01240
Biosynthesis of cofactors
Module
sbi_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
8055409
Enzymes [BR:
sbi01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
8055409
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
8055409
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
8055409
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
8055409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_1
TPP_enzyme_M_2
Abhydrolase_6
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Abhydrolase_2
Thioesterase
Ndr
Abhydrolase_3
Abhydrolase_11
DUF1057
DLH
Abhydro_lipase
LIDHydrolase
Mbeg1-like
TPP_enzyme_M
MenC_N
BAAT_C
DUF676
Peptidase_S15
Esterase
Motif
Other DBs
NCBI-GeneID:
8055409
NCBI-ProteinID:
XP_002452353
LinkDB
All DBs
Position
4:54543122..54557442
Genome browser
AA seq
1703 aa
AA seq
DB search
MLAVSPPPRLPLLTSTPLRAFPPLPPRRRGLSRLRRLRRGTPLVLLRARAGSHAGIAIDV
DEVAENGDRDLPVDVSFTRRLPPALTVGDGLDALLRAANEVKATPPAGARSGVIRFEVLV
PPSTKALKWCSQFRGSSLFPQFYLSRKLTSAPSFQLEICGIGSAICFRGSYLVKNEFDLV
SRYISSESHLIKAYGFVDMNYDKESSLVEEKLGSYYFFIPQVELSEFDSCSILSSTLVWD
DSMSHTFEDAVSLFESCFNQIQNSYDSSASISHKGLVPSYISGDAHLSETGNAQLVYLDT
EVLASIDAKASVQKENFLTSDRSFVRFSPQLFLYSNMELYLQRNTIESFIKSCSNINLAW
ASLIVEECVRLGFTYFCIAPGSRSSPLALSATGHPLTKCISCYDERSLGFHALGYGRGSR
KPAVVITSSGTAVSNLLPSVVEASQDFVPIILLTADRPPELHDAGANQAINQVNHFGTFV
RYFFNLPPPGDQIHARMVLTTLDSAAYYAMQAPQGPVHINCAFREPLDYTNQHWNVDCLR
GLDKWFKNSEPYTRYLRMKTVSAFGNYSCSVMEVLEIIEKAEQGLLLVGAIHTDEDMWAV
ALLARHLSWPVATDILSGLRLRKVVNSLPGFDKNILFIDHIDQILLSDSAKNWISPDVIL
QIGSRITSKRVGMFLETSFPSSYILIDRHPCRHDPSHIVTHRIQANVAEFAASLRRCTFQ
RKRSRWTEILTILNSVVSQEIMFQIHAKCSLTEPYVAHVIGESLCGDAVMFVGNSMVIRD
LDMFGNGWMDYTTNGNNVMTHHLPDFVGTAVAGNRGASGIDGLISTAIGFAVGSNKHVFC
VVGDISFLHDTNGLSLLNQRAWRKPMTIIVVNNHGGAIFSFLPVAKTTSPQILEKFFYTS
HDISISELCSAHRVKHFRVQTKEELHDALVKSNMEQVDCVVEVDNSIDSNANFHRIMSMF
SNYSTSQYLAYLLEAPCLKSDVDAIPVDRIDAVECMLYRIQLSAPRTSGLSDGRFIHEGF
VLKLRVDDNIVGFGEVAPIEIHEEDLLDVEEQLRFLLHRVKDSMLDFIPLLRGSFSNWIW
TSLGIPPSSIFPSVKCGLEMAILNLLASQRKCSLFKVLAGCDPLGRDENVIEYNQNSSGS
IQICALVDCNGSPMEVALAVAKLAAEGFTTFKLKVGRRESPIEDAAALHKIREVVGYQIN
IRVDANKKWTYEQAVEFGSRVKSLRLEYIEEPVSSVNDLIKFCENSVLPVALDETIDNLK
GDIIPKLHQFVHPGIVALVIKPSVVGGFENAAHIAKWAQLHDKMAVISSTYESSIGLASY
IQLAHYVDQQNSIVSRIRNKVTCRAAAHGLGTYQWLREDVSEQKLKIHASPLGDGIRASV
EDAHGYLHHLNINDDKIQRTYGEEKLRSYSIQVDVDDCSYLVKLREAGDHTNEKVVLLLH
GFLGTSEDWIPMMNALAPSARVIAIDLPGHGESQILQHHKNSEQFVLTVQLVADLLLKLM
CHITDGKVVVVGYSMGARIALHMALNQDHKIRGAVTISGSPGLRDEASRRRRIAIDKSRA
QFLMSCGLECFLQTWYSGKLWSSLREHPEFNSLVRTRSKHKNIKALAKVLADSSVGRQKS
LWEDLKHLKRPLLIVAGEKDAKFKDISQKMRMEIMNQAECGSDGPKGKELCEMTIIPDSG
HAVHVENPLPLVRAVRKFLLKLY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtctcgccccctcctcgccttcctctcctcacctccacccccctccgcgct
ttccctcctctcccacctcgacgccgcggcctctcccgcctccgcagactccgcagaggc
acccctctcgtcctgctccgcgcgcgcgcagggagtcacgctgggatcgcgatcgacgtc
gacgaggtggctgagaatggggaccgcgacctccccgtggacgtatcgttcacgaggagg
cttccccccgcgctcactgtcggtgacggcctcgacgcactgctgcgggccgccaatgag
gtcaaggccaccccgcctgctggcgccaggagcggcgtgatcaggttcgaggtacttgtt
ccacccagtacaaaggcacttaagtggtgctctcagtttagaggatcatcactgtttcct
cagttttatttatcaaggaagctgacgtctgctccatcattccaacttgaaatctgtggc
attggttccgcaatatgctttcgtggttcctacctagtaaagaatgaatttgatttggta
tcgagatatatttcttctgaatcacacctgataaaggcttacggattcgtagacatgaat
tatgataaggaatcatcattggtagaagagaaacttggctcatattacttcttcatccct
caagttgagttgagtgagtttgatagttgttccatattatcatctaccctggtttgggac
gattctatgtctcatacgtttgaggatgcggtttctttatttgaatcttgttttaatcag
atacaaaatagctatgattcttcagctagcatttctcacaaaggcttggtaccaagttac
atttctggagatgcacatttgtcagagactggaaatgctcagttggtgtatttggataca
gaagtgctagcctcaatagatgccaaagctagtgtgcaaaaggagaactttctgacttct
gatcggtcatttgttagattttcaccacagttattcctttattcaaacatggagttatat
ttgcaacgcaacaccattgaatctttcatcaagagttgctctaacataaatttggcatgg
gcatccctcatagttgaagaatgtgttaggctcggtttcacgtacttttgtatagctcca
gggtcgagatcatccccgcttgcactttctgctacaggccatcctttgacaaaatgcata
tcatgttatgatgaacgttcacttggatttcatgctcttggctatgggagaggttctcga
aaaccagcagtagtaatcacatcatcaggaaccgctgtatcaaatcttcttccttcagtg
gttgaggcaagtcaagatttcgtaccaattatattactcacagctgaccgtcctcctgag
ttgcatgatgctggagctaaccaagccatcaatcaggtcaatcattttggtacctttgta
agatatttttttaatctccctccacctggagaccaaatacatgcaagaatggttctcact
acacttgattcagcagcctactatgcaatgcaagcaccacaaggcccagtgcatataaac
tgtgcttttagagaaccactagattacactaatcaacattggaatgtcgactgtttgcga
ggtttggataagtggtttaaaaatagcgaaccatatactagatacctaagaatgaaaaca
gtttctgcattcggtaattactcttgctcagtaatggaggtcctggagatcatagagaag
gcagaacaaggtcttcttttagtgggtgctattcatacggatgaagatatgtgggctgta
gctttactagccaggcacctatcctggccagttgctacagatattctgtctggactgcga
ttgcggaaagttgtaaattcattgccagggtttgataagaacattttgtttatagaccac
attgatcaaattctattgtctgattctgctaaaaactggataagcccggatgtcattctt
cagattggtagccgtattactagcaaacgagtgggaatgtttctagagacatccttccca
tcttcctacatcttgatcgatagacatccgtgtcgtcatgatccttcacatattgtcact
cacagaatacaagctaatgtagcagaatttgctgctagtttgcgccggtgtacttttcaa
agaaagagaagcagatggacagaaattttgaccattcttaactcagtggtttctcaggag
ataatgtttcagatacatgcaaagtgctcacttacagaaccatatgttgctcatgtaata
ggggagtcactttgtggtgatgctgtcatgtttgttgggaacagcatggtcatccgagac
ttagacatgtttggcaacggttggatggattacactacaaatggaaataatgtgatgacg
catcatttgccagactttgttggcacagcagtggctgggaacagaggagcaagtggcatt
gatggtttaatcagcacagcaatcggatttgctgttggatcaaacaagcatgtattctgt
gtggttggtgacatatcttttcttcatgatacaaatggattgtcacttctcaaccaaagg
gcatggaggaaacctatgacaataattgttgtcaacaaccatggtggtgcaatcttcagc
tttctaccagttgcaaaaactacttcaccacagattttggagaaattcttctacacctct
catgacatatcaatttccgaactatgttctgcacacagggtaaaacattttcgtgttcaa
acaaaagaggagcttcatgatgcattggtgaaatccaatatggaacaggttgattgtgtg
gtagaagtagacaatagtattgatagcaatgccaactttcataggatcatgagcatgttc
tctaactattctacaagtcagtatctggcctatcttctagaagctccatgtcttaagagt
gacgtagatgccatacctgttgacagaattgatgcagtggaatgcatgttgtacagaatc
cagctttctgcaccacgtacttcagggctatctgatggtagattcattcatgaaggattt
gttctgaagcttcgtgtggatgataacattgtaggatttggagaggttgcaccaattgaa
attcatgaggaggatctgttggatgtcgaagagcaacttaggtttcttctccacagggtg
aaagattctatgctagattttattcccttactgagagggtccttttccaattggatatgg
acaagccttgggattcctccttcttcgatattcccaagtgttaaatgcggtttggagatg
gctattcttaatttacttgcatcacaacggaaatgtagtttgttcaaagttctagctggt
tgtgaccccttgggccgagacgagaatgttattgaatataatcagaacagttctggaagc
atacaaatttgtgcactcgtagattgcaatggctctccaatggaagtggcacttgctgtt
gccaaactggctgctgaaggttttaccacatttaagctgaaggttggccgccgtgaaagc
cccattgaggatgcggctgctcttcacaaaataagagaagttgtagggtaccagatcaat
atccgtgttgatgcaaataaaaaatggacatatgaacaggcagttgaatttggatctagg
gtaaaaagtcttcgcttggaatacattgaggaaccagtgagctctgtaaatgatctcatc
aagttctgtgaaaatagtgtcttgcctgttgcacttgatgagactattgacaacctcaag
ggagatataattcctaagcttcatcaatttgttcatccaggaatagttgctcttgttata
aaacctagtgttgttggaggttttgagaatgcagctcatattgcaaaatgggcacagcta
catgataagatggctgtcatcagtagcacgtatgagagttctataggtttggcatcctat
atacagttagcacattatgttgaccaacagaactcgatagtctccagaataagaaacaaa
gttacatgtagagctgccgcacatggacttggaacgtatcagtggttaagggaagatgta
tcagaacaaaagttaaagatccatgcatccccacttggtgacggaatccgagcctcagta
gaagatgcccatggttatcttcaccatttaaacataaacgatgacaagatacaaaggacg
tatggtgaagaaaaacttaggtcatattctatccaagttgatgtggatgattgttcttat
ctagtcaaacttcgagaggccggtgatcatacaaatgaaaaggttgttcttttacttcat
ggatttcttggtacgagtgaagactggattcccatgatgaatgctcttgcccctagtgca
cgagtaattgcaattgatcttcctggtcatggcgagtcacagatattgcagcatcacaaa
aattcagaacaatttgttttaacagttcaactagttgcagatttattgttgaagttgatg
tgccacataactgatggcaaggtggtggtggttggctattcaatgggtgcaaggattgca
ctgcacatggcactaaatcaagatcacaagattcgtggagctgttacaatatcaggaagt
cctggattgagagatgaagcaagcagaagacgccgtattgctattgataaatcaagagcc
cagttcctgatgtcttgtggacttgaatgtttccttcagacatggtactctggaaaactg
tggagcagtctacgagaacatcctgagttcaattctcttgtgaggacacgcagtaaacac
aaaaacatcaaagctctagctaaggttcttgcagactcaagcgtggggagacaaaagtcc
ctgtgggaagacctgaagcacttgaagaggcctttactcatcgttgctggtgaaaaggat
gcaaagtttaaagacatctcgcagaaaatgcgcatggagataatgaaccaagcagaatgt
ggatctgatggtcctaaagggaaggaactttgtgaaatgaccattatcccagatagcggc
catgctgtgcatgttgagaaccctcttcctttggtgagagctgtgaggaagttcttacta
aagctgtattga
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integrated database retrieval system
