KEGG   Sorghum bicolor (sorghum): 8068462
Entry
8068462           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8068462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8068462
Enzymes [BR:sbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     8068462
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     8068462
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 8068462
NCBI-ProteinID: XP_002447199
UniProt: C5Y8Y9 A0A921QTT9
LinkDB
Position
6:57770629..57780840
AA seq 1239 aa
MEELQKDSGQPSNGSDSEPEAMVLDDNGAGKSRSMEGNEDSPIDADVGKDSPIDVNEGQS
SMDVDIKAKSSLNDDVNGKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQIN
SYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEG
SVDFKPWHARLQNMTYASRLKVEVTIQVYSLEKSDKSKTGNEGFVQKRNFMNETHWIFIG
LLPVMVKSNLCLLHSLKESECLFDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWMIS
FMHEIKRRRIYIKLVESTRSEDFSGSKVISISFLYATMPVWLLFFALGISSDKEAFDVID
MQDCDASVINTISATIKESDELCKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLF
PDINGNRNKAFFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLE
RRMVKAIQRDLNNDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLR
RTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAI
VSSRVGQPLIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRR
SSMIDPQVEIKRDKHHKEVRVFSDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEII
EFIGVEEEEDIQCAWGIRHLFESEGAISSYTHCELDPSFLMGLSCGIIPFANHNFARRVL
YQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTAFGRKDDYT
RPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKTDVENKDGTKRLK
LKEKIDFGKTESKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGM
VQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVP
DIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHKAGYSRWG
AENVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGV
KFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYC
GFCKSSENIVRINVPYGAKLLYQELFSMGICLKFDTEVC
NT seq 3720 nt   +upstreamnt  +downstreamnt
atggaagagctacagaaggacagtgggcaaccatcaaatggctctgattctgagccagaa
gctatggtattggatgacaatggagcaggaaaatcccgtagcatggagggaaacgaggat
tctcctatagatgccgatgtaggcaaggattctcctatagatgtcaatgaaggccagtcc
tctatggatgtggatattaaggcaaaatcttctctcaatgatgatgttaatggaaagtct
tcttccgagccatattccaatgctccaatcgacatgagtgtggaaagcctagagaaattt
tgcaaagaagcatcaaggtccttctttgatgaagttggtctgataagccatcagataaat
tcctacaatgagtttgtctcacatgggctccaggagctttttgattcgctgggggaagtg
atcgttgaacctggctatgatccttcaaagaaaggatcaggtggctggaagcatgccatc
ataaagtttgggagagtgaagcttgaaaagcctgtgttttggaccggcaaagatgaaggt
tctgttgattttaaaccttggcatgctcgtctccagaatatgacatatgcttcaagactt
aaagtagaagtgactattcaggtttattctttggagaaaagtgacaaatcgaaaacaggg
aatgagggttttgttcaaaaaaggaacttcatgaatgaaactcattggatatttattggc
ctccttccggttatggtgaaatcaaacttatgtttgttgcatagtctcaaggaaagtgag
tgcctgtttgatgcaggtggatactttttggtcaagggaatggagaaggtattcattgct
caagagcaaagatgtctaaagaggctttgggttagtgatcgtcctttctggatgatctct
tttatgcatgaaatcaagcgtagacgtatatatattaaactagttgaatctacaaggagt
gaagatttcagtgggagcaaagtcatttccatttcctttttgtatgcgacaatgccagtc
tggttgttgttctttgcacttggaatatcatcagataaggaagcctttgatgtgatagat
atgcaagattgcgatgcttctgttatcaacacgatatctgcaaccatcaaagaatctgat
gaactgtgtaaaggctttcgtaaatcagataaagctcgtcaatatgttgatgagttggta
aaaagttcgagatttcctccggcggagtcctttgatgactatgttgctaggtttctcttt
cctgatattaatggaaataggaacaaagcatttttcttagggtacatggtgaaatgtctg
ctaatggcttttactgggaagcgtaaatgtgataataaggatgatttcaggaacaagagg
ctggacctacctggtgaattgcttggaagggaacttagggcgcaacttaggctgttagag
aggcgcatggttaaggccattcaaagagatttaaataatgaccgcgagttacaagatctt
gaacgttatatagatgcatcgattgttactaatggtctaaatcgtgccttttccactggt
tcttggtgccatccctacaaaagagctgaacggtgctcaggaattgttgcgactctaaga
agaactaatcctcttcaaatgatgtctgacttgaggaaaacccggcagcgggttgcttat
gctgggaaagctggtgatgcaagatatccaaatccatcctattggggaaagctgtgtttt
ctgtccactccggatggtgaaaactgtggacttgtaaaaaatctagctgttactgctatt
gttagctcaagggtggggcagcccttgattgagagcttcatttcttgtggaatgagtaag
ctgaatgacattcctacggagcacattcaaagaatggataagatctttttgaatggcaat
tgggtgggatcttgtaaagattcagcttcatttgtatttcgattgaggtgcatgagacgc
agcagtatgattgatcctcaggttgaaattaaaagggacaagcaccacaaggaggttcgt
gtgttctctgatgcagggagaatcctcagaccccttcttgtggttgagaatcttaataaa
atcagaaaaccgaaagggcgttcattctctttccaggaattaatgcaacaagaaataatt
gagttcattggtgttgaagaggaagaagatatacaatgtgcgtggggaatcaggcatttg
tttgagagtgaaggagcgatatctagttatactcactgtgagctggatccttcctttctt
atgggattaagctgtggtatcattccttttgcaaaccacaattttgctcggagggtgttg
taccaatctgaaaaacactcgcaacaagctattgggtactcaacgacaaatccacacatc
agagttgatactctttctcatcaactttattatcctcagaggcctcttttcaaaacagtt
atagccgactgtcttggcagatcagattatactgcttttggaagaaaagatgactacacg
agaccagaatattttaatggacaaaatgcaatcgtagcagtgaatgttcatcaggggttt
aaccaagaggattccctggttatgaatagggcttctcttgaacgaggtatgtttaggact
gaacacctcaggagctataagacagatgtagaaaacaaggatggaaccaaacgattgaaa
ttgaaggaaaagatagactttggaaaaacagaaagcaaaagagggcgtgttgacaatctt
gatgatgatggcttaccttacattggtgcaagtcttcagaccaatgacatcgtcattgga
aaagtctcagaatctggagaagaccacagtattaagctgaagcatacagaaaagggaatg
gttcagaaagtattgctttcagcaaatgatgaagggaagaattttgctgttgttacttta
agacaggttcggacaccttgccttggagataagttttccagcatgcatggccaaaaaggt
gttgttggttttctagaatctcaagagaacttcccatttactcacgaaggtatagtccca
gatattgtgataaatccacatgccttcccaacacgtcaaactcccggacaactgcttgaa
gctgctctggggaagggaatagcctgcaaaggtacaatgagatatgcaacaccattcacc
acagcatctgttgacgttattgcagagcagttgcacaaggctggttattcacggtgggga
gctgagaatgttctaaatggccgaactggtgaaagaatgcaatccttggttttcatgggt
cctaccttttaccagaggctgattcatatgtccgaagataaggtgaaattccgtaacact
gggccggtgcaccccctcacgaggcagcctgttgctgacaggaaaaggtttggcggagtt
aagtttggagaaatggagcgtgattgcctcctcgcccacgggtcagctgccaacctgcat
gagcgcctcttcatgcttagtgacttctcccagatgcacatctgccagacatgcgagcgt
gtggccaatgttgtcatgaggtctgttcctggaggcaaaaagatccgtggcccctactgc
ggcttctgcaagtcttcggagaacatagtgaggatcaatgtgccctatggcgcgaagctg
ctctaccaggaactcttcagcatggggatctgcctcaagtttgacaccgaagtctgctag

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