Sorghum bicolor (sorghum): 8073378
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Entry
8073378 CDS
T01086
Name
(RefSeq) glutamate decarboxylase 2
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00250
Alanine, aspartate and glutamate metabolism
sbi00410
beta-Alanine metabolism
sbi00430
Taurine and hypotaurine metabolism
sbi00650
Butanoate metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
8073378
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
8073378
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
8073378
00430 Taurine and hypotaurine metabolism
8073378
Enzymes [BR:
sbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
8073378
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DotU
Motif
Other DBs
NCBI-GeneID:
8073378
NCBI-ProteinID:
XP_002446562
UniProt:
C5Y9A8
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All DBs
Position
6:46657147..46659743
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AA seq
508 aa
AA seq
DB search
MVLTHVHDLDDAAAASAVVFASRYVQDPLPRYELGEKSISKDAAYQIIHDELLLDSSPRL
NLASFVTTWMEPECDRLILEGINKNYADMDEYPVTTELQNRCVNIIARLFHAPAVGASSD
GKAVGVGTVGSSEAIMLAGLAFKRRWQNRRKAAGKPYDKPNIVTGANVQVCWEKFARYFE
VELKEVKLREGCYVMDPDEAVRMVDENTICVAAILGSTLTGEFEDVKMLNDLLAAKNAET
GWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKED
LPEDLIFHINYLGADQPTFTLNFSKGSSQIIAQYYQFLRLGFEGYRNVMENCMESAQTLR
EGLEQMGRFTIISKEQGVPLVAFTFKSKDETSLAFKLSSELRRYGWIVPAYTMPANLEHM
AVLRVVVWEDFGRPLAERFLSHVRMALEELDHAAKGGPVPRMRVTIELGPPDRGSGEEAS
ARVVKREAVVVPVHRSVSLSGGKTKGVC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggttctgacgcacgttcacgacctcgacgacgcagcggccgcgtcggccgtcgtgttc
gcctcgagatacgttcaggacccgcttccaaggtacgagctgggggagaagtccatctcc
aaggacgcggcgtaccagatcatccacgacgagctgctgctggacagcagcccgcggctg
aacctggcgtcgttcgtgaccacgtggatggagcccgagtgcgacaggctcatcctggag
ggcatcaacaagaactacgccgacatggacgagtaccccgtcaccaccgagctccagaac
cggtgcgtcaacatcatcgcgcggctgttccacgcgcccgcggtgggcgccagcagcgac
ggcaaggccgtcggcgtcggcacggtgggttcctcggaggccatcatgctggccggtctg
gccttcaagcggcggtggcagaaccggcggaaggcggcgggcaagccctacgacaagccc
aacatcgtcaccggtgccaacgtgcaggtgtgctgggagaagttcgccaggtacttcgag
gtggagctcaaggaggtgaagctccgggaaggctgctacgtcatggaccccgacgaggcc
gtgcggatggtggacgagaacaccatctgcgtcgccgccatcctcggctccacgctcacc
ggcgagttcgaggacgtcaagatgctcaacgacctgctcgcggccaagaacgccgagaca
gggtgggacaccccgatccacgtggacgccgccagcggcggcttcatcgcgccgttcctg
tacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggc
cacaagtacggcctcgtctacgccggcgtcggctgggtcatctggaggagcaaggaggac
ctgcccgaggacctcatcttccacatcaactacctcggcgccgaccagcccaccttcacg
ctcaacttctccaaagggtctagtcaaatcatcgcgcaatattaccaatttcttcgatta
ggcttcgaggggtaccgcaacgtgatggagaactgcatggagagcgctcagacgctgcgg
gaggggctggagcagatgggccgcttcaccatcatctccaaggagcagggcgtgccgctg
gtggccttcacgttcaagagcaaggacgagacctcgctggcgttcaagctgtcgtcggag
ctgcgccggtacgggtggatcgtcccggcgtacacgatgccggcgaacctggagcacatg
gccgtgctccgcgtcgtggtctgggaggacttcggccggccgctggcggagcggttcctg
tcccacgtgcggatggcgctggaggagctcgaccacgcggccaagggcgggcccgtgccc
aggatgcgggtcaccatcgagctcggacctcccgacaggggctccggcgaggaggcgtcc
gccagggttgtcaagcgggaggccgtcgtggtgccggtgcaccgcagcgtgtcgctctcc
ggcgggaagaccaagggcgtctgctag
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