Sorghum bicolor (sorghum): 8075529
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Entry
8075529 CDS
T01086
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8075529
Enzymes [BR:
sbi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
8075529
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
8075529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
8075529
NCBI-ProteinID:
XP_002447859
UniProt:
C5Y8P7
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Position
6:complement(45311784..45315335)
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AA seq
623 aa
AA seq
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MEDIEDVLGPADLSGGGAPPGLRLPLAAVAVKPKRRSSRVAQAPPQPEARIPGTQTIYVK
TFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKNPSQSAMTTLISKCKNA
NKPLVVAGCVPQGSQGLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDL
PKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVDRVKTVVSEGVREIWLS
SEDTGAYGRDISTNLPNLLNAIVAELPVDQSTMLRIGMTNPPFILEHLKEIAAVLCHPCV
YSFLHVPVQSGSDAVLTAMNREYTVAEFRKVVDTLYELVPGMQIATDIICGFPGETDEDF
SETVNLVKEYQFPQVHISQFYPRPGTPAARMKKVPSNEVKKRSRELTSVFELFSPYQGME
GKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSLLGTSANVKITSVGRWSVFGEVIEG
SVVVGEAPKQTSAKLQKEHIQNQVEEAGCCATDSCGTCACSNEAQQCSPERCEDTSHAPE
TCGDVTRQEALQPTLVRRSVEGTTKGSKSSAAHSLGKEQQVKVVTRRGVNIDTILWCGLA
VSFAVTIALLVILTSKISSTSSP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgaggacgtgctgggtccggccgacctctctggcggcggagcgcctccg
gggctccggctcccgctagccgccgtcgcggtgaagcccaagcgacggtcgtccagggtc
gcgcaggcgccgcctcagcccgaggcccggatccccggcacgcagacgatttacgtcaag
actttcgggtgctcacataaccagagtgacagtgaatacatgtcaggtcagctctctgca
tttggatatgcgatcactgaagagcccgaaggagcagatttgtggctaattaacacatgc
acagtgaaaaatccaagtcaatctgcaatgacaaccctcatatctaaatgcaagaatgca
aacaagccactagtagtggctggatgtgtaccccaaggaagccagggcctcaaggagctt
gaaggtattagtataattggagtgcaacagatagaccgggttgttgaagtggttgaggaa
actttaaagggccatgaggttcggctgttgagtcggaaaacactgccctcgcttgattta
cctaaggtaagaaagaacaagtttatcgagattcttcctattaatgtgggatgtttaggt
gcctgcacatactgtaagacaaagcatgctcgtggtcatttgggaagctatactattgac
agcttggtggatcgtgtgaaaactgttgtctccgaaggtgtcagggagatctggttgagc
agcgaagatactggtgcttatggacgggatatcagtacgaaccttcccaatttgttaaat
gcgattgttgcagagcttcctgttgaccaaagcacaatgctccgcataggcatgacaaat
cctcctttcatactagagcatttgaaggagatagctgccgttttgtgtcatccctgcgtt
tactctttcctccatgttcctgtgcaatctggaagcgatgctgttttaacggcaatgaat
cgtgaatacactgttgctgagttcagaaaggtagttgacactctgtatgagcttgtccct
ggaatgcaaattgctacagacattatctgtggctttcctggcgagactgatgaagatttc
tctgagactgttaacctcgtaaaggaatatcaattccctcaagttcacatttcacagttt
tacccgaggccagggacacctgctgctaggatgaagaaagtaccaagcaatgaagtgaaa
aagcggagtcgtgaactgacttcagttttcgaattattttcaccataccaaggaatggaa
ggcaaagtagagaggatctggatcaccgagattgcgactgatggtgttcacttagttgga
cataccaagggatatatccaggttctggtaattgctcctgatagcttgttaggaacgtca
gcaaatgtgaagatcacatctgttggacgatggtctgtctttggtgaagtgatagaagga
tctgttgtagtaggagaagcaccaaagcaaactagtgccaaactgcagaaagaacacata
cagaatcaggtggaggaagctggttgttgtgccactgactcttgtggcacctgtgcatgc
tccaatgaggcacagcagtgcagtccagaacgatgtgaagacacatctcatgctccggag
acctgtggtgatgttactcgtcaggaggcactccagcctacgcttgtgaggagaagcgta
gagggaactacgaaaggaagtaaaagcagtgcagcacattcactagggaaggaacagcag
gtgaaagtagtaactaggagaggggtaaatatcgacacgattttgtggtgcggtttggcc
gtcagcttcgccgtaacgatagccctgcttgtaatccttaccagcaagatttcatcgaca
tcgtccccctag
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