Sorghum bicolor (sorghum): 8081255
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Entry
8081255 CDS
T01086
Name
(RefSeq) tryptophan synthase alpha chain
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00402
Benzoxazinoid biosynthesis
sbi00999
Biosynthesis of various plant secondary metabolites
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
8081255
00999 Biosynthesis of various plant secondary metabolites
8081255
Enzymes [BR:
sbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
8081255
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GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
ThiG
BtpA
FMN_dh
Ribul_P_3_epim
IGPS
KDGP_aldolase
NMO
TMP-TENI
NanE
Motif
Other DBs
NCBI-GeneID:
8081255
NCBI-ProteinID:
XP_002463737
UniProt:
C5WX66
A0A921UWN8
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Position
1:4235310..4237319
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AA seq
340 aa
AA seq
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MALFAVQAASTSQSSSSSPAVLQQSPLPSRRAAAAAVKKMPQRKKAAAVVRAVAAPPPAP
PVPGPPKPAGERCRLPVSQTMSRLKAQGKTAFIPYITAGDPDLATTAEALRLLDACGADV
IELGVPFSDPYADGPVIQASMARARTTGGGATPDGVLAMLREVTPELSCPVVLFSYFNPI
VRWGLPGFAAAVKDAGAHGLIVPDLPYADTCALRSEAIKNDLELVLLTTPATPEERMKEI
TEASEGFVYLVSVNGVTGSRADVNTRVESLIQEVKQVTDKPVAVGFGISKPEHVKQIAEW
GADGVIIGSAMVKQLGEATSPKEGLKRLKEYARSMKNALQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttcgcggtccaggctgcatcgacatcccagtcgtcgtcttcttcgccggcg
gttcttcagcagtcgccgttgccctcgaggcgggcggccgcggcggcggtgaagaagatg
ccgcagcgaaagaaggctgcggcggtcgtcagggcggtcgccgcgccgccgccggctccg
cctgtaccggggccgcccaagccagctggcgagcggtgccgcctgccggtgtcgcagacc
atgtccaggctcaaggcgcagggcaagacggcgttcatcccgtacatcaccgccggcgac
cctgacctggcgacgacggcagaggcgctgcggctcctggacgcctgcggcgccgacgtc
atcgagctgggcgtgcccttctccgacccctacgccgacgggccggtcatccaggcctcg
atggcgcgggcgcggacgacgggcggcggcgcgacgccggacggcgtgctggcgatgctg
agggaggtgacgccggagctgtcctgcccggtggtgctcttctcctacttcaaccccatc
gtgcggtggggcctgcccggcttcgccgccgccgtcaaggatgcgggtgcacacggccta
atagtgcctgatctgccttacgcggacacgtgtgcactgaggagtgaagccatcaagaac
gacctcgagctggtgctgcttacgacgccagctacaccggaagagaggatgaaggagatc
acagaagcttccgaaggctttgtttaccttgtgagtgtcaatggagttacaggttcccgt
gcagacgtgaacacgcgtgtcgagtctctcattcaggaggttaaacaggtcactgataaa
cctgtggctgttggatttggcatctccaagcctgagcatgtaaaacagattgcagagtgg
ggtgcggatggagtgatcattgggagtgcgatggtgaagcagctgggtgaagcaacatct
cccaaagaagggctcaaaaggctaaaggaatatgcaaggagcatgaagaatgcactgcaa
tga
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