Sorghum bicolor (sorghum): 8155346
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Entry
8155346 CDS
T01086
Name
(RefSeq) probable solanesyl-diphosphate synthase 3, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00900
Terpenoid backbone biosynthesis
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8155346
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbi01006
]
8155346
Enzymes [BR:
sbi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
8155346
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
8155346
Prenyltransferases [BR:
sbi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8155346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
8155346
NCBI-ProteinID:
XP_021321875
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All DBs
Position
8:20338171..20353142
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AA seq
489 aa
AA seq
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MGGDKARADDRKPRPPTRPRSKARATPAFATRLAPACGRLPRRVSPAHRTHKNCKTPGPR
TLPPPPPDPRSMSMAAPSSSLASSCHISRRATATATAAAQSHSPPLPQQLRLGCFQRGAR
AQSACRAASRRRTPGVCFVVSPSQPGLAAIDVPAAPNATTVPDRTSVSSLLEVVSDDLLK
LNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLSELSTEHQRLA
EIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIE
VIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVST
SICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPEL
REIIDSEFSETDSLAAAIELVHRSGGIRRAHELAREKGDMAIQNLQCLPRSDFRSTLESM
VKYNLERIE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgataaggcgcgagcggacgatagaaagccgcggccgccaactcgcccacgc
agcaaggcacgggccactcccgccttcgccacccgcctggcgcctgcctgtggtcgcctg
ccgcgtcgcgtgtcaccggctcaccgcactcacaaaaactgcaagacgcctgggccgcgc
acgctgccaccaccgccacccgacccgaggagcatgagcatggcggcgccgtcgtcctcc
ctcgcctcttcctgccacatctcccgccgcgccaccgccaccgccacggccgcggcccag
tcgcactcgcctccgctgccgcagcagctccgcctcgggtgcttccagcgcggcgcgcgc
gcgcagagcgcctgcagggcggcatcgaggaggcgcacgccaggtgtttgcttcgtggtc
tcaccaagccagccaggtcttgctgcgatcgacgtaccggcggcgcctaatgcgacgacc
gtccccgaccgtacttcggtgtcctcgcttttggaggttgtttcggacgacttgctgaaa
ctaaacaacaatctaaaatcgcttgttggtgcagaaaatcctgttctggtttctgcggct
gaacaaatttttggtgccggtggaaagagattaagaccagcattagtttttctggtgtct
agagcaactgctgagttagctggtttgtcggagctaagtacagaacaccaacgattggca
gagattatagagatgattcacaccgcaagtttaatacatgatgatgtcatagatgatagt
gggatgcgaagaggaaaggaaactattcatcagctatatggtacacgggtggctgtactt
gctggtgattttatgtttgcacaatcttcttggtttcttgcaaacctagaaaacattgaa
gttataaagctgatcagtcaggtcatcaaggacttcgcaagtggtgagataaaacaagca
tccactctttttgactgtgacatcactcttgatgattaccttctcaagagctactacaaa
actgcatctctgatcgcagcaagcacaaggtcagccgccatattcagtggcgtcagcacc
agtatttgtgaacaaatgtatgaatatggcaggaatcttgggctgtccttccaggtagtt
gatgacatcctggactttacccaatcagctgagcaacttggcaaaccagcaggaagtgac
ctggcgaagggaaacctgacagctccagtcatctttgctttgcaagatgaaccagagcta
agagagatcatcgattccgagttcagtgagactgattcattagctgctgcgatagagctt
gttcacaggagcggtggaataaggagggcacatgaacttgcgagagagaagggtgacatg
gctatccaaaacctgcagtgccttccgagaagtgatttcagaagtacccttgagagtatg
gtaaaatataaccttgaaaggattgaatag
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