Syngnathoides biaculeatus (alligator pipefish): 133490481
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Entry
133490481 CDS
T09681
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133490481 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
Notch
NOD
EGF_2
NODP
Ank_4
Ank_3
Ank_5
EGF_3
EGF_MSP1_1
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
133490481
NCBI-ProteinID:
XP_061656589
LinkDB
All DBs
Position
17:complement(17851603..17883432)
Genome browser
AA seq
2466 aa
AA seq
DB search
MYRFFARLAYLLPTLIFVSQGLKCSLPTESCLNGGRCEPGPNGNGDCKCPSDYVGNRCQF
PSPCSPSPCRNGGECRAVSRGNTFDFRCVCRLGFADRLCLTQSNHACMSAPCRNGGTCDL
VGLAKYHCRCPPGWSGETCQLPNPCTSNPCANGGQCSAFDSSFICACPPAFHGQTCKQDV
NECAQSPTPCLNGGVCVNEVGSYHCRCPQEYAGPHCETRYLPCSPSPCQNGGTCVQKGDA
VYDCSCPPGFTGQNCEHNIDDCPGHSCQNGGVCVDGLNSYNCQCPPHYTGQYCNENVDEC
ALIPKACQNGGTCHDTHGSYHCVCVNGWTGDDCRENIDDCASAACYHGATCHDRVASFFC
ECPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLG
ANPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSSPCQNDATCLDQIGGFHCICM
PGYEGVFCHINTDECASHPCLNSGKCVDKISSFHCECPQGFSGNLCQVDIDECASTPCKN
GAECTDAPNEYTCECAEGYTGKHCEIDVNECYSDPCHYGACRDGLASFTCLCRPGYTGRL
CETNINECLSQPCKNGGTCQDRENMYICSCPKGTAGFNCEIDLDDCKSRPCDYGRCIDKI
NGYECACEPGYAGTMCNINIDDCAVNPCHNGGTCVDGVNRFTCLCPEGYDDVTCLSQVDE
CGSNPCIHGRCQDLVNGYKCACDSGWSGPNCDINNNECESNPCTNGGTCKDMTSGYHCTC
RAGFTGPNCQTNINECASNPCLNQGTCMDDVAGYKCNCQLPYSGENCETLLAPCNSRPCK
NGGLCKESEDYQSFSCSCPGGWQGQTCEIDINECVKSPCRNGALCHNTMGSYQCKCLPGY
VGPKCETDVDDCKPNPCSNGGLCRDGVDAFACACPPGFRGGRCEQDVNECESSPCRNGAN
CTDCVNSYTCTCPPGFGGINCEVNANDCTDSSCFNGGTCEDGINAFTCLCLPGFTGSYCQ
YDINECDSRPCLNGGTCLDSFGTYKCTCPQGYTGVNCQNLIRWCDSSPCKNGGTCWQKGA
SYTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVVHLCRNSGQCLDAGSTHYCRCQAGYTG
SYCQEQVDECSPNPCQNGATCTDYLGGYSCECLPGYHGVNCSKEINECQSQPCQNGGTCI
DLVNTYKCSCPRGTQGVHCEINLDDCNPSSDPLTHEPKCFNNGKCVDRIGGYQCVCPAGY
VGERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNG
GTCAVASNTPHGFICKCPLGFTGSSCEYDSRSCGNLNCRNGGTCVSGHLGPRCLCPPAFI
GPECLTPTDSLCISNPCYNGGTCQITPDAPYFQCSCPSNFNGLLCHILDYSFVGGFGRDI
TPPPEVEVSCENPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRY
FNDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGL
DCANNMPEKLADGHLVLVVHIPPEQLKNRSSAFLRDLSGVLHTNVVFRRDAKGEPMIFPY
YGNEQDLVKHNVLKRSADGWPEWAAVPANVLGQMKDKVSAVVSPRKRRELDSLQVKGSIV
YLEIDNRQCYQQSSECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPSSSELYPMY
VVFLGLAALGFVSLGVLVSRKRRREHGQLWFPEGFKASEPSKKKRREPVGEDSVGLRPMK
ICDINLMDDNQNEWADEDPDCRRFKFEEQSMLDLRDRTDQRKWTQQHLDAADLRIASIAP
TPPQGEMENDCMDVNVRGPDGFTPLMIASCSGGGLETANSEEEEDPSAEIITDFIYQGAN
LHNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADANATDDSGKSALHWAAAVN
NVQASVILLKNGANKDMQDNKEETPLFLAAREGSYETAKVLLEHFANREITDHLDQLPRD
IAQERMHHDIVRLLDEYNVVRSPGLHAAPLSASAGLSPPLCSPNDYLGNLKPSLSVKKVR
KGGKDGGKDNRVKKKKSPDGKGNLLDTSAALSPVDSLESPHGYLSDAASPPVTSPFQQSP
PISLSHLQGKGDPHIGQMSMSFDPNPPRLSHMPVSSPNGPGPTSIGGTRVGQCDWMSRMH
PSQQGSFHQASPMSRNMMGGLNGVGTATLSQIMGYQNLQTSHLGSPAAHMIQQAHSRQLQ
HQNSNSATTAGQAMTQGFPAIELNGGEMPQNSGRAVAVHSVMPQETQILGAQFLTPPSQH
SYSGPADNTPSHQLQVPDHPFLTPSPGSPDQWSSSSPHSVSDWSEGISSPPTSIHSQMNL
IPEQFK
NT seq
7401 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgcgaggctggcatatctccttccgacactcatcttcgtctctcaa
ggtctaaaatgctccctgcccaccgagtcctgtctgaacggaggaaggtgtgaacccggc
cccaatggaaatggagactgcaagtgtcccagcgactacgtgggcaaccgatgtcaattt
cccagcccgtgcagcccgtcgccgtgccgcaacggcggcgagtgccgcgccgtctcccgc
ggcaacaccttcgacttccgctgcgtgtgcaggctgggcttcgccgaccgcctctgcctc
acgcaaagcaaccacgcctgtatgagcgcgccctgccgcaacggcgggacgtgcgatctc
gtcgggctcgccaagtaccactgccgctgcccgcctgggtggtcgggcgaaacgtgtcaa
ctcccgaacccgtgcacttcaaacccgtgcgccaacggcggccagtgctcggctttcgac
tccagcttcatctgcgcctgcccgccggccttccacggtcagacctgcaagcaggacgtc
aacgagtgcgcccagagcccgacgccctgcctcaacggcggcgtctgcgtcaacgaggtg
ggctcgtaccactgccgctgccctcaggagtacgccgggccgcactgcgagacccgctac
ctgccgtgcagcccctccccgtgccagaacggcggcacctgcgtccagaaaggcgacgcc
gtctacgactgtagctgtccgccaggattcacgggtcagaactgcgagcacaacatcgac
gactgtccaggccacagctgtcagaacgggggcgtgtgcgtcgacggactcaactcctac
aactgccagtgcccccctcattacacaggccagtactgcaacgagaacgtagacgagtgc
gcgctgatccccaaagcgtgtcagaacgggggcacctgccacgacactcacggcagctac
cactgcgtctgcgtcaacgggtggaccggcgacgactgccgggagaacatcgacgactgc
gccagcgccgcctgctaccacggcgccacctgtcacgaccgcgtggcctcctttttctgc
gagtgtccgcacgggcgcacaggtctgctgtgccacctggatgacgcgtgcatcagcaac
ccgtgccagaaaggctccaactgcgacaccaacccggtcaacgggaaggcgatctgcaca
tgtccgccgggatacaccgggtcagcctgcaacctggacatcgacgagtgctccctcggc
gccaacccctgcgagcacggcggtcgctgtctcaacaccaaaggctcgtttcagtgcaag
tgtcttcaggggtacgagggcccccgttgcgagatggacgtcaacgagtgcatgtccagt
ccgtgccagaacgacgccacctgccttgaccagatcgggggattccactgcatctgcatg
ccgggttatgaaggtgtattctgccatattaacacggatgagtgtgccagccatccttgc
ctcaacagcggcaaatgcgttgacaagatcagctccttccactgcgagtgtcctcaagga
ttttcagggaatctgtgccaggtggatatcgatgagtgtgccagcaccccttgtaaaaac
ggagcagagtgcaccgacgcccccaacgagtacacctgcgaatgtgctgaaggttacacc
gggaagcactgcgagatcgacgtcaacgagtgctactcggacccctgccactacggcgcc
tgcagggacggcctggcctcgttcacgtgcctctgccgtccgggctacacgggccgcctg
tgcgagaccaacatcaacgagtgtctgagccagccctgcaagaacggcggcacttgccag
gatagagagaacatgtacatctgttcctgccccaaaggcaccgcaggtttcaactgcgag
atcgacctggacgactgcaagagccgcccctgcgactacgggaggtgcatcgacaagatc
aacggctacgagtgtgcgtgcgagccgggctacgcgggaacaatgtgcaacatcaacatc
gacgactgcgccgtcaacccgtgtcacaacggcgggacgtgcgtggacggggtcaacagg
ttcacctgcctctgccccgagggctacgacgacgtcacttgcctgtcgcaggtggacgag
tgcggcagcaacccctgcatccacggccggtgccaggacctcgtcaacggctacaaatgc
gcctgcgactccggctggagcggcccgaactgtgacatcaacaacaacgagtgcgagtcc
aacccgtgcacgaacggcggaacctgcaaggacatgaccagcgggtaccactgcacgtgc
agggcgggcttcacaggtcccaactgccaaactaacatcaacgaatgtgcctccaacccc
tgcctcaaccaaggcacctgcatggacgacgtggcgggctacaagtgcaactgccagctg
ccgtacagcggtgaaaattgcgagactttgctggccccgtgcaactcgagaccctgcaaa
aacggcggcctgtgcaaagagtccgaggactaccagagcttctcgtgcagctgtcccggg
gggtggcaaggtcaaacgtgcgagattgacatcaacgaatgcgttaagagcccgtgccgc
aacggtgccctctgtcacaacaccatgggaagctatcagtgcaagtgcctgcccggctac
gtgggtccgaagtgcgagaccgacgtcgatgactgcaagccaaatccgtgcagcaacggc
ggcctgtgccgcgacggcgtcgacgctttcgcgtgcgcctgcccgcccggcttccgcggc
ggccgctgcgagcaggacgtcaacgagtgcgagagcagcccctgccgcaacggcgccaac
tgcaccgactgcgtcaacagctacacgtgcacctgcccgcccggcttcggcggcatcaac
tgcgaggtcaacgccaacgactgcaccgacagctcttgcttcaacggcggcacctgcgag
gatggcatcaacgccttcacctgcctgtgccttcccggatttaccggcagctactgtcaa
tatgacatcaacgagtgcgactccagaccgtgtctcaacggtggaacgtgcctggacagt
ttcgggacctacaagtgcacctgcccccaaggttacacgggagtcaactgccagaatctc
atacgctggtgcgattcgtccccctgcaagaacgggggcacgtgctggcaaaagggggcc
tcctacacctgccagtgccaaactggttggaccgggctctactgcgacatcccaagcgtc
tcgtgtgaagtcgcagccaaacagcaaggtgtagaagttgttcacctgtgcaggaactcg
ggccagtgcctcgatgccggaagcacgcattactgccgctgccaggcgggctacaccggc
agctactgccaggagcaagtggacgagtgctcccccaacccgtgccagaacggcgccacg
tgcaccgattacctcggaggctacagttgcgaatgcctccccggttaccacggggtaaat
tgctcgaaggagatcaatgaatgccagtctcagccctgtcagaacggaggaacttgcatt
gatctcgtcaacacctacaagtgctcctgtcccagaggaacccaaggtgtccactgtgag
atcaatctggacgactgcaacccgtccagcgacccgctgacccacgagcccaaatgcttc
aacaacggcaaatgcgtggatcgcatcggaggataccagtgcgtgtgcccggcgggctac
gtgggcgagcgctgcgaaggggacgtcaacgagtgcttgtcggatccttgtgatccgagg
ggctcgtacaactgcatccagctcaccaacagttaccgctgcgaatgccgcactggatat
acaggccagcgttgtgacaaagtgtttgatggctgcaaaggaagaccgtgcagaaacgga
gggacgtgcgcagttgccagtaacactccccacggcttcatctgcaagtgtccactgggc
tttactggctcctcctgtgagtacgactctcgctcctgtgggaatctaaactgccggaac
ggaggcacgtgcgtatcgggccacctcggcccacgctgcctgtgtcctccggccttcatc
ggacccgagtgcctgacccccaccgacagcctctgcatctccaacccgtgctacaacggc
ggcacttgccaaatcacaccagacgcgccgtacttccagtgcagctgccccagcaatttc
aacggccttctgtgccacatcctggattactccttcgtcggcggtttcggccgcgacatc
acacctcccccggaagtggaggtgagctgcgagaacccccagtgcgacgagtgggccggc
aaccacatctgcgactcgctgtgcaacaaccacgcgtgcggctgggacggaggcgactgc
tccctgaatttcgatgacccttggcaaaactgctcggcggctctgcagtgctggcgttac
ttcaacgacgggaagtgcgacggccagtgcaacagccccggatgtctctacgatggcttt
gactgtcaaggacaggaaggccaatgcaacccactttacgaccagtactgcaaagaccac
tacgccgacggccactgcgatcagggctgcaacaacgccgagtgtgaatgggacggcctg
gactgcgccaacaacatgccggaaaagctagcggacgggcatttagtcctggtggtgcac
attccgccggagcagctcaaaaatcgctcttcggccttcctccgagacctcagcggcgtc
cttcacaccaacgtggtgttccgccgcgacgccaaaggggagcccatgatcttcccttat
tacggcaacgagcaggacctggtcaagcacaacgtgctgaagcgttccgcggacggctgg
cccgagtgggcggcggtgccggcgaatgttttgggtcagatgaaggacaaggtgtccgcc
gtggtcagcccgcggaaacgcagggagctggattccctgcaagtcaaagggtctatcgtc
tacttggagattgacaaccgccagtgttaccagcaatccagcgaatgcttccaaagcgcc
acagacgttgcagcgttcctcggggcgcttgcctccagcgggaatctcaacgttccctac
atcgaagctgtcaccagtgtgagacccactccttcgagttcagaactctaccccatgtac
gtggtcttcctgggattggcggctctgggtttcgtaagcctcggcgttttggtgtcgcgc
aagcggcggcgggagcacggccagctttggttcccggagggattcaaggcatccgagccc
agcaagaagaaacgcagagagccggtcggggaagattctgtcggactgaggcctatgaaa
atatgtgatataaatctcatggatgataaccaaaacgaatgggctgacgaggatccagac
tgcagacgtttcaagttcgaggagcagtccatgctggatctgagggaccgtaccgaccag
aggaaatggacccagcagcatctggatgcggccgacctgcgtatcgcgtccatagccccc
acgcccccacaaggggagatggagaatgactgcatggatgtcaacgtcagaggaccagac
ggtttcactccgctgatgatcgcctcctgcagcgggggaggactcgagaccgctaacagc
gaagaggaagaggatccttccgccgagatcatcacagacttcatttaccagggcgcaaac
ctccacaaccagaccgaccgcacaggcgagacggccctccacctggccgcccgctacgcc
cgctccgacgccgccaagcgcctcctggagtccagcgccgacgccaacgtccaggacaac
atggggcgcactcctcttcatgctgctgtggctgcagatgcgcagggggtgttccagatt
ttaatccgaaaccgcgctaccgatcttgacgcgcgcatgcatgacgggacgacgccgctg
atcctggcggccaggttggcagtggagggcatggtggaagagcttatcaactgccacgcc
gacgccaacgccactgacgattctggcaaatctgcgcttcactgggctgcggctgtaaac
aatgtgcaagcttccgtgatcctgctaaaaaacggtgccaacaaagacatgcaagacaac
aaggaagagacaccgctcttccttgccgcccgtgagggaagctacgagacagccaaggtc
ctcttggagcacttcgcgaaccgcgagatcaccgaccacctggaccagctgccgagggac
atcgcccaggagcgcatgcaccacgacatcgtgcgcctgctggacgagtacaacgtcgtc
cggagcccggggcttcacgccgcccccctgagcgcctccgccggtctctccccgccgctc
tgttccccgaacgactacctcggcaacctcaaacccagcctgtcggtcaagaaagtgcgc
aaaggagggaaagacggcggcaaagacaacagggtgaagaagaagaagtcgccggacggg
aagggcaacctgttggacacgtctgccgccctctccccggtggactccctggagtccccc
cacggctacttgtccgacgccgcctcgcctcccgtgacctcaccgttccagcagtcgccc
ccgatatctctcagccaccttcaagggaagggcgacccgcacataggtcagatgagtatg
tcttttgatcccaacccaccccgcctctcccacatgccggtctccagccccaacggtccg
ggccccacgtctataggcggtaccagggtgggccagtgtgactggatgtccaggatgcac
ccgagccaacaggggagcttccaccaggcctcacccatgtcccgcaacatgatgggaggt
ctcaacggcgtcggcacggccaccctgtcgcagatcatgggctaccagaacttacagacc
agccacctgggctcgcccgccgcgcacatgatccagcaggcccactcgcggcagctccag
caccagaactccaactccgccacaaccgccgggcaagccatgacgcagggcttccccgcc
atcgagctgaacggcggcgagatgccacaaaacagcgggcgcgccgtggccgtccacagc
gtgatgccccaggagacgcagatcctcggcgcccagttcctcacgccgccctcccagcac
agctattcgggacccgctgacaacacgcccagccaccagctgcaggtgcccgaccaccca
tttctgacgccctcccccggctcgcccgaccagtggtccagctcgtccccccattccgtg
tccgactggtcggaaggtatctcgagtcccccgaccagcatccactcgcagatgaatctg
atcccggaacagttcaagtag
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integrated database retrieval system
