Syngnathoides biaculeatus (alligator pipefish): 133491153
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Entry
133491153 CDS
T09681
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04020
Calcium signaling pathway
sbia04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133491153
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133491153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133491153
Ion channels [BR:
sbia04040
]
Ligand-gated channels
Glutamate (ionotropic)
133491153
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
133491153
NCBI-ProteinID:
XP_061658039
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All DBs
Position
17:complement(7934255..7975487)
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AA seq
947 aa
AA seq
DB search
MRLFLLAVLVWCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQDTNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSVQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMLDGTCKEEMTLNGVLIKKVICTGPNETIPGRPTVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPDPK
KKASFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcggctctttctgttggcggtgctcgtctggtgctcgtgtgcgcgggccggatgcgag
ccgaaaattgtcaacatcggagccgtcctgagccaaaagaggtacgagcaggtcttcaaa
gacgcagtgacccaagccaaccaagtctacggacgggacaaatttaagctcacggccatc
tccgtcacgcataaacccaacgccatccagatggctctgtctgtgtgtgaggacctcata
tccagtcaggtttatgccatcctagtgagtcacccgccccagtccaatgaccacctgact
ccgacacctgtctcctacactgcaggcttctaccgcatccctgtggtgggcctcaccact
cgcatgtccatatactcagacaagagtatccatctgtcctttctgcggaccgtccccccc
tactcgcaccaggcgcacgtgtggtttgacctgatgcgcgagttcaactggaaccatatc
atcctgattgtgagcgatgaccacgagggtcgagctgctcagaagaggctggagacgctc
ctggaggagagagaaaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaagacactaac
ttaacagccctactgctggaggccaaagaactggaggcccgagtcatcatcctttccgct
agcgaggaagacgccgccgctgtgtacaaggctgcccgcttcctcaacatgacaggctcg
ggctacgtgtggttggtgggcgagcgggagatgtcgggtaaagcgctgagcgaggcgccg
gacggtttgatcggcctgcagctcatcaatggcaagaacgagtcggctcacatcaacgat
gcagtggcggtggtggcccagtccgtccaggagctctttgagaaggaaaatataactgag
ccgccaagaggatgtgtgggcaacactaacatctggaaaacaggccctctcttcaaaagg
gtgctcatgtcctcaaaatacccagagggtctcacaggacgtgtggagttcaatgacgac
ggagacaggaagtacgcccactacagcattctcaactaccagaagagccgactcattcaa
gtggggatttataatgggacacaggtggtgatgaacaatcagcggaagattatctggcct
ggtggggagacggaaaaaccacagggcttccagatgtctactcgattaaagatagtgaca
atacaccaggagccttttgtatatgtgaaaccaactatgctggatggaacatgcaaggag
gaaatgacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggacgcccaaccgtgccgcagtgttgctatggattctgcattgatctcctgatc
aagctggccatgaccatgaactttacttatgaggtccatctggtggctgatgggaaattt
ggtacccaggagcgggtgaacaacagtaacaagaaagagtggaatggcatgatgggagag
ctcctggggggcttggctgacatgattgttgccccgctgacgataaacaacgaacgagcg
cagtacattgagttctccaaacccttcaaatatcaaggtctgaccatccttgttaaaaag
gaaatccctcgcagcacactggactcgttcatgcagccatttcaaagtactctgtggctg
ctggtgggtctttcggtacatgtggtggcggtgatgctttacctactagaccggttcagc
ccatttggaagatttaaagtaaatagtgaagaagaagaggaagatgccctcaccttgtca
tctgccatgtggttctcctggggagtgttactaaactctggaattggagaaggtgcacct
cgcagcttctcagcgagaatccttggtatggtgtgggctggttttgccatgatcattgtg
gcttcctatactgccaacttggctgctttcctggtgctggatcggcctgaggagcgcatc
accggcatcaatgacccaaggctcagaaacccatctgacaagttcatctatgccacggtg
aagcagagctccgtggacatctacttccggcggcaggtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgaaagtgccgccgaggccatccaggcagtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaatggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgaaaacatggcaggggtcttcatgcttgtggctggtggcata
gcagcagggatcttcctcatcttcattgaaatagcctataagcgccataaagacgcccgc
aggaagcagatgcagctcgcctttgcggccgttaatgtttggaggaagaacctgcagcca
tcttcctctctagagactcaggatgatagaaaaagtggtagagcagagcccgaccccaaa
aagaaagcctcttttaggtccatcagtaccaccctggcctccagcatcaagagacgtagg
tcctccaaagacacgcaatacccacccactgacatcacaggacagctcaacttgtccgat
ccttccgtcagcactgtggtgtag
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