Syngnathoides biaculeatus (alligator pipefish): 133495264
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Entry
133495264 CDS
T09681
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03020
RNA polymerase
sbia04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133495264 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
133495264 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133495264 (polr3a)
Enzymes [BR:
sbia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133495264 (polr3a)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
133495264 (polr3a)
BRITE hierarchy
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
133495264
NCBI-ProteinID:
XP_061665680
LinkDB
All DBs
Position
22:18036124..18051358
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSADQMRQQAHIQVVSKNLYSQDTKHSPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGFLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
EKLQFMDMLKRPNLPYLHKRGLKKKISDKCRKRSLCLNCSAFNGTVKKCGLLKIIHEKYK
SSKKVVEPFVSEFLQSFDTAIEHNKLMEPLLARAQENLNPLVVLNMLKRIPQEDVPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IENRRNQMKRFLKYGNREKIAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTAGYLLTLKDTFFDRSKACQIVASILVGKDEKVKIALPRPAVMKPMALWTGKQI
FSLILKPSKDCPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKSTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YRKCDEYIEALQTGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPADMEGKDEPLEFKRVLDNIRAVHTCPDEPTLSQGELLLTSEAIMKQADFGC
CRDSFLEEIQKFIKGISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLKKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRESSKSSMYYVMQSLKAELPKVV
VQGIPEVARAVIHIDEQSGKSKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAERDPRLATRPLLFD
TPDLHVPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggacgtggccaagaaaataagccacatttgcttc
ggcatgaaatcagccgatcaaatgcgtcagcaggcccacattcaggtggtcagtaagaat
ctctacagccaggacaccaaacactcgccgctgccttacggcgtgttggaccaccgcatg
gggaccagcgagaaagaccgaccgtgcctaacgtgcgggaagaatctggccgactgcttg
ggacactacggcttcctggatttggaactgccgtgtttccacgtgggctacttcaaagcc
atcattggaatcttgcagatgatttgcaagacgtgctcgagcatcatgctgaccaaagaa
gagaagctgcagttcatggacatgctgaagcggcccaacctgccgtacctccacaaacga
ggcctgaagaagaagatctccgacaaatgccgcaaacgaagcctctgtctcaattgctcg
gcgttcaacggcacggtgaagaagtgcggcctgctgaagatcatccacgagaagtacaag
agcagcaagaaggtggtggagcctttcgtgtccgagttcctgcagtccttcgacacggcc
atcgagcacaacaaactcatggagccgcttttggcgcgggcgcaggagaacctcaaccct
ctggtggtgctcaacatgttgaagcgcatcccccaggaggacgtgccgctgctgctgatg
aaccccgaggcgggcaaaccggccgacctcatcctcacccgcctgctggtgccgccgctc
tgcatccggccctccgtggtcagcgacctcaagtcgggcaccaacgaggacgacctcacc
atgaagctcacggagatcatcttcctcaacgacgtcatcaaaaagcatcgcatgagcggc
gccaagacgcagatgatcatggaggactgggacttcctgcagctgcagtgcgcgctgtac
atcaacagcgagctgtccggcatcccgctcaacatggcgcccaagaagtggaccagaggc
tttgtgcagagactcaagggcaagcaaggtcgattccgaggcaatctgtcggggaaaagg
gtggacttttcgggcagaaccgtcatctcccccgaccccaacctgaggatcgacgaagtg
gccgtacccgtgcacgtggccaaaatcctgacctacccggagagggtgaacaaagccaac
ctggagctcatgagaaaactggtccgaaacggcccggacgttcaccccggcgccaacttc
atcgaaaatcgacgcaaccaaatgaaaaggttcttgaagtacggcaaccgggagaagatt
gcgcaggagctgcgcttcggcgacgtggtggagaggcacatgatcgacggagacatcgtg
ctgttcaatcggcagccctcgctgcacaagctcagcatcatggctcacatcgcccgcgtc
aagcctcaccggactttccgcttcaacgagtgcgtgtgcacgccgtacaacgccgacttt
gacggcgacgaaatgaatctccacctgccccagactgaggaggccaaagctgaggctctg
gtgctcatggggacaaaagctaatctcgtcacgccaagaaatggcgagccgctcatcgcc
gctattcaggacttcctgacagccggctacctcctgacgctgaaggacaccttcttcgac
cgatccaaagcctgccagattgtggcgtccatcctcgtgggcaaggacgaaaaagtcaag
atcgccctcccccgcccggctgtaatgaagcccatggctctttggacaggcaagcaaata
ttcagcctcatcctgaagcccagcaaagattgtcccgtcaaggccaacctgcggacgaag
ggcaagcagtactgtggcaaaggcgaggacttgtgccacaacgactcgttcgtggtaatc
cacaacagcgagctgatgtgcggcagcatggacaagagcaccttgggctcaggctccaag
aacaacatcttctacatcctgctgagagactggggacagctggaggcggccaacgccatg
tcccgcctggcgcgactcgcccccgtctatctttctaaccgaggcttttccatcggtatc
ggggacgtgacgcccggccagggcctgctgaaggccaagcaggacctcctggacgacggc
taccgcaaatgcgacgagtacatcgaagccctgcagacggggaagctgcagcagcagccc
ggctgctcggccgaggagaccctggaggccctcatcctgcgtgagctgtcggtcatcaga
gaccgagctggcagcgcctgcctcagggaactggacaagagcaacagtcctctgatcatg
gctctctgcggctccaaaggatcttttattaacatctctcagatgattgcatgcgtgggc
cagcaggccataagtggatctcgagtacctgacggttttgaaaatcgttccctgcctcac
tttgaaaagcactccaaattgcccgccgcgaaaggcttcgtggccgacagcttctactcc
ggcctgacgcccactgagttcttcttccacacgatggctggccgcgagggcctggtggac
accgccgtgaaaaccgcagagacgggctacatgcagcggcgtttggtgaagtcgctggag
gatctgtgctcccagtacgacctcacagtgcgaagctccaccggcgacatcatccagttc
atctacggcggcgacggcctggaccccgcagacatggagggcaaggacgaaccgctggag
ttcaagagggtcctggacaacatccgggcggtccacacgtgtccggacgagcccacgctc
agccagggcgagctgctgctcacgtcagaagcaatcatgaagcaagcggactttgggtgc
tgccgagacagcttcttggaggaaatccaaaaattcatcaagggcatctccgagaggatc
aagaagaccagagacaagtacggcatcaacgacaacggcaccagcgagccaaaggtcctc
tatcagctggaccgcataactcccacacagttgaagaagtttctggaaacatgcagagac
aaatacatgagagcgcagatggagccgggctcggcggtgggggccctgtgcgcccagagc
atcggcgagcccggcacgcagatgaccctcaagaccttccacttcgccggcgtggcgtcc
atgaacatcacgctcggcgtacctcgcatcaaggagatcatcaacgcctccaagaacatc
agcacgccgatcatcaccgcgcacttggacgtggaggacgacgccgactttggccggctg
gtgaagggcaggatcgaaaaaacgctcctgggcgagatttcggaatacatcgaagaggtc
tttctaccagacgactgtttcatcttggtcaaattgtccttggagcgaataaggctgctg
cgactggaggtgaacgccgagacggtgcgttactccatctgcatgtcgaagctgcgcgtg
aagccgggcgacatcgccgtgcacggcgaggctgtggtgtgcgtgtcgccgcgggaaagc
agcaaaagctccatgtactacgtcatgcagtcgctgaaggccgagctgcccaaggtggtg
gtccaaggaatacccgaggtcgcccgggccgtcatccacatcgacgagcagagcggcaag
agcaagtacaagttgctggtggagggcgacaacctgcgcgccgtcatggcaacccacggc
gtgaacggaagcaggaccacttccaacaacacgtacgaggtggagaagacgctgggcatc
gaggcggccaggtccacgatcatcaacgagatccagtacaccatggtcaaccacgggatg
agcatcgaccggcgccacgtcatgctcctcgccgacctcatgtcctacaagggggagata
cttggaatcaccagattcggcttggccaaaatgaaggagagcgtcctcatgctggcgtcc
ttcgagaaaacggccgaccacctcttcgacgccgcctacttcggccagaaggactcggtc
tgcggcgtgtcggagtgcatcatcatgggcattcccatgaacatcggcacgggcctcttc
aagctgctgcacaaggcggagcgagacccccgcctggccacgaggcccctgctcttcgac
acgcccgacctccacgtacctctcgtcacgtaa
DBGET
integrated database retrieval system
