Syngnathoides biaculeatus (alligator pipefish): 133502560
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Entry
133502560 CDS
T09681
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03020
RNA polymerase
sbia04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133502560 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
133502560 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133502560 (polr3b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133502560 (polr3b)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
133502560 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
133502560
NCBI-ProteinID:
XP_061679467
LinkDB
All DBs
Position
6:31673782..31715348
Genome browser
AA seq
1132 aa
AA seq
DB search
MEVLGGEFCNMSQQELAAPVKTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMS
ANEKITSDADPMWYIKYLNIYIGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPLEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLTEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMINAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDYHKLVSTFRLMRRAGFINEFVSISTNMADRCVYISSDGGRLCRPYIIVKK
GQPMVKNKHIEDLSQGYRSFEDFLHEGLVEYLDVNEENDCQIALYEHMMNKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVLGPMLDAATRKPIWRHNILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSTQPGQPQYREVPISYKGPTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgctcggaggagagttttgcaacatgtcccaacaggaactggcggctcctgtc
aagactgtcgaggaaaaatggaaactcttacctgccttcttaaaggtgaaaggcttagtg
aagcagcacatcgactcgttcaactatttcatcaatgtagagatcaagaaaatcatgagt
gccaacgagaagataacaagtgatgcggacccgatgtggtacatcaagtacctcaatatc
tacattggcatgcctgatgtggaagagagcttcaatgtgacgcgaccagtctcccctcat
gagtgtcgtctccgagacatgacctactcagcacccatcactgtggacatagagtacaca
cgcggcagtcagagaatcatccgcaatgctctgcccattggaaggatgcccatcatgctt
cgaagctccaactgtgtcctcacaggaaagacaccgttggagttctcaaaactgaacgaa
tgccccctggatccgggtgggtatttcattgtaaaaggtcaagagaaagtcattctgatc
caggagcagctgtccaagaacagaataattgtggagcaggacaggaaaggagcagtggga
gcctcagttaccagctccactcacgagaagaaaagcagaacaaatatgattgtaaaacaa
ggccgattctacctgaagcacaacaccctgacagaggacgcacccatcgccattatattc
aaggggatgggtgtggagagtgaccaggagatcgtacagatgattggcacggaggagcat
gtcatggccagttttgccccaagtctggaggaatgtcaaaaagctcaaatattcacgcag
actcaggctctgaggtacctcgggaataaagtgcggaggcagcgcatgtggggaggaccc
aagaaaaccaaaatggaggaggccagggaactgctcgcttcactaattctcacacatgtg
cctgtgaaagaatttaacttcagagccaagtgtatttacctggcagtgatggtgcgcagg
gtgatcctggctcaaggggacaacaaagtggatgacagagattactatggcaacaaacgt
cttgagttggccggacagcttctgtccttgctctttgaagacttgtttaaaaagttcaac
tctgaactgaagaagattgccgaccagatcatccccaaacagagggcggcacagttcgat
gtggtcaagcacatgagacaggaccagatcacgaacggcatgatcaacgccatttccact
ggcaactggtccctgaagagattcaagatggaccgtcagggcgtgacacaggtgttgtct
cgtctctcttacatttcggctctggggatgatgacccgtatatcctcccagttcgagaag
acccggaaggtcagcgggccgcgctccctgcagccctcacagtggggcatgctgtgcccg
tccgatacacctgaaggcgaggcctgcgggctggtgaaaaacttggccctgatgacgcac
atcaccactgacatggaagacggtcccatcatcaagctggccttcaacctgggtgtggag
gatgtcaacttgctgtgcggagaagagctttcctaccccagcgtcttcctcgtctttctc
aatggaaacattctcggcgtcattcgagattatcacaagctggtcagcacattcaggctg
atgcgcagggcgggattcatcaacgagtttgtgtccatctccaccaatatggccgaccgc
tgtgtgtacatctcatcggatggagggcgcctctgcagaccatatatcatcgtgaaaaag
ggccagcctatggtgaaaaacaaacacattgaggatctgtcgcagggctacagatctttt
gaggactttctgcacgaaggtctggtggaatacctggatgtcaacgaggagaatgactgt
cagatcgccctttacgagcacatgatgaacaaagacacaacccacttggagattgagccc
ttcacacttctgggggtgtgtgctggcctcattccctacccccaccacaaccagtcgccc
aggaacacatatcagtgtgctatgggcaagcaagccatgggtacgattggctacaaccag
aggaaccgcatcgacacgctgatgtaccttctggcgtaccctcagaggcccatggttaaa
accaaaaccatcgagctaatcgacttcgagaagctgccagctgggcaaaatgccactgtg
gccgtgatgagctacagtggctacgacattgaggatgcactggtcctcaacaaagcgtca
ctcgacagaggctttggtcggtgtcttgtgtacaaaaacgccaagtgtacactacggcgt
tacaccaatcaaacatttgacaaggtcttgggacccatgctggatgctgccaccagaaag
cccatctggaggcacaatatccttgacgctgacgggatctgctctcccggtgagcgggtg
gagaacaagcaggtgcttgtcaacaaatccatgccgactgtcactcagacgccactggag
ggcagcacccagccaggccagcctcagtacagagaagtgccgatcagctacaagggccca
acggactcttatattgagaaggtaatgatttcgtccaacgccgaagatgccttcctcatc
aagattctactcaggcagaccaggaggcccgaaatcggagacaagttcagcagtaggcat
ggacagaaaggggtttgtggcctcatcgtaccccaagaggacatgccgttctgtgacaca
ggcatttgtcctgacatcatcatgaaccctcacggatatccttcccggatgacggtgggg
aagctcattgaactgctggctggcaaagcgggagtcctagatggacgcttccactacggg
acggccttcgggggcagcaaggtgaaggatgtgtgcgaggacctgatccgctatggatat
aattaccaggggaaagactatgtcacctctggcatcactggtgagcctctggaggcatac
atctactttggacctgtgtattaccaaaagctgaagcacatggtcttagacaagatgcat
gctcgagcacgtggtcctcgagccgtcctaaccaggcaaccgacggagggccgttccaga
gacggaggtctgcgtctgggcgagatggagcgcgactgtctgattggttacggtgccagc
atgttgctgctcgagcgcctcatgatctctagcgatgcctttgaggtcgacgtgtgtgga
cagtgtggccttctgggttactctggctggtgtcactactgcaagtcgtcgtgtcacgtg
tcatcactgcgaattccctacgcttgcaagctgctcttccaggaattgcagtccatgaac
atcatccctcgactcaagctgtcccgctacaacgagtga
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