Syngnathoides biaculeatus (alligator pipefish): 133503019
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Entry
133503019 CDS
T09681
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133503019 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sbia04090
]
133503019 (vcam1b)
04091 Lectins [BR:
sbia04091
]
133503019 (vcam1b)
CD molecules [BR:
sbia04090
]
Proteins
133503019 (vcam1b)
Lectins [BR:
sbia04091
]
I-type lectins (Siglecs)
133503019 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
ICAM1_3_5_D2
C1-set
ICAM_N
Adhes-Ig_like
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
133503019
NCBI-ProteinID:
XP_061680084
LinkDB
All DBs
Position
7:complement(11699152..11706252)
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AA seq
747 aa
AA seq
DB search
MRPLVCFFSGALMWWWWRCVHGLRVDISPGRPLFKLGERGQLWCSVSECAAAPVVSWTPL
GDRPLDADVETRGLLSLLTFDPVEMQHEGPLLCKVTCGEQRKHAKTHVGLYAFPSDPVIL
GHDTVREGEESTLTCEVRDLYPAEMLTLDWLRGEQVLRSVAGEAGATAVRSTYGFTPRRA
ESGQNLTCRATLELRDLMPRERTRLVHARIRVTFAPVVTALSDPGAVPSGSVLVLKCSAA
GDPPPVLTWTFRPEGRGAPQVKGHGGELALVAQEGEYRCEAHNQEGKDSKAVRVQVYAPP
SNTSMWVHPGQEVLEGQRVTFVCRSDGAPPPSLVLRRDGAELQVSDTAPSLTFSLMAQPQ
DSAHYQCAAANAFGTQRVTRRVAVTAVNQLTICRWRGGVVVVVRLCEAHPLRVEVRPQVA
SAAVNSAVLLTCECWGCSSPPTLTWTRTAPSGAVPPPQEESRLVLRDVQPRDRGGYVCRA
TCDNVTRSGRATVHVYSLPSDPVVREGGAVPLGQEARLRCDVRDVFPAERLRLSWRWGDE
NLPVRTFEPRPSPRNISAVLSRRADAERRLVSCEARLLTEAGAVWRSRKSSVLLTVHSPP
RNTTVLVLPSASVSAGQNVTVLCRSGGFPPPGVVLRKVSDGTERRSADGIFPLVNVTARD
SGLYRVNATNDLGHQVRVFRLNVTEPSVMTPPTLTAVLVPATVGAVGLAAAALVLDYLRR
SKKKRSYRLTPSEPPAEGHALSAAPTL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccactcgtctgcttcttctcaggtgcgctgatgtggtggtggtggcggtgcgtc
cacggcctccgggtggacatttctcccggcaggccgctcttcaagctgggcgagcgcggg
cagctttggtgctccgtgagcgagtgcgccgcggcgcccgtcgtctcgtggacgccgctc
ggcgaccggcccctcgacgccgacgtggaaactcggggccttctgtcgctgctgaccttt
gaccccgtggagatgcagcacgagggtccgctgctgtgtaaagtcacgtgcggggagcag
cgcaaacacgcgaaaacgcacgtcggcctttacgccttcccgtcggaccccgtcatcctc
ggtcacgacactgtccgcgagggggaggagtctacgctgacgtgcgaggtgcgtgacctt
taccccgccgaaatgctgactctggattggctgagaggagagcaggtgctgcgcagcgtc
gcgggggaggccggcgccaccgccgtccggtcgacttacggcttcacgcctcgtagggcg
gagtcggggcaaaacctcacctgccgggccactctggaactgcgggacctgatgccccgc
gaacgcacccgcctcgtccacgcccgcatccgcgtcacgttcgctccagtggtgacggcg
ctgtcggaccccggcgcggtgccttcggggtccgtcctggttctgaagtgctctgccgcc
ggcgacccgccgccggtcctcacgtggacgttcaggcccgagggacgtggggcgccgcag
gtcaagggtcacggtggggagctggcgctggtcgcacaggagggggagtatcgctgcgag
gcgcacaaccaggagggcaaagacagcaaggcggtccgggttcaagtctacgctccaccc
agcaacacgtccatgtgggtgcatccgggtcaggaagttctggaaggccagcgggtcacc
ttcgtttgtcgctcggacggagccccgccccctagcctggtgctcaggagggacggagcg
gagctccaggtgtcggacaccgccccctcgctaacctttagcctaatggcgcagcctcaa
gactccgcccactaccagtgcgctgccgccaacgccttcggaacgcaacgagtcacgcgg
cgcgtcgccgtcacagccgtcaatcaattgacgatttgtcggtggcgtggcggcgttgtt
gttgttgtgcgtttgtgtgaagctcacccgctgcgcgtggaggtgcgcccgcaggtggcg
tcggcggccgtgaattccgccgttcttctgacgtgtgaatgttgggggtgttcgtcgccg
cccacgctcacctggacgaggacggcaccctcgggcgccgtcccgccgccccaagaggag
tctcgcctcgtcctgcgggacgtccagccgcgggaccgaggaggatacgtgtgccgggcc
acctgcgacaacgtcaccaggagcggccgggccaccgtccacgtctactcgctgccgtcc
gatccggtggtgagggagggcggggcggtgccgctgggccaggaggcgcggctccggtgc
gacgtgagggacgtgttcccggccgagcggctccgtctgtcgtggcggtggggcgacgag
aacctgccggtccggaccttcgagccccggccgtccccgcggaacatctcggccgtgctg
agtcgccgcgccgacgccgagcggcgcctggtgagctgcgaggcccggctgctgacggag
gccggcgccgtgtggaggtccaggaagtccagcgtgcttctcaccgtccactctcctccc
aggaacacgacggtcctggttctgccgtcggcgtcggtgtcggcgggccagaacgtgacc
gtgttgtgtcgttccggcggttttccgccgcccggcgtcgtcctgcgaaaagtgtcggac
gggacggagcgccgctcggccgacgggatcttcccattggtcaacgtgacggcccgcgac
tcggggctctaccgggtcaacgcgaccaacgacttgggccaccaggtccgggtgttccgc
ctcaacgtgacagagcctagcgttatgactccgcccactctcaccgccgtcctggtgccg
gccaccgtcggtgcggtcggattggccgccgccgctctggtcctggactacctgagaagg
tccaagaagaaacgatcctaccggctgacgccctcagagcctccggctgaaggccacgcc
ctcagcgccgcccccaccctgtga
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