Syngnathoides biaculeatus (alligator pipefish): 133509534
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Entry
133509534 CDS
T09681
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03008
Ribosome biogenesis in eukaryotes
sbia03013
Nucleocytoplasmic transport
sbia03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133509534 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
133509534 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133509534 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133509534 (xpo1b)
03009 Ribosome biogenesis [BR:
sbia03009
]
133509534 (xpo1b)
03016 Transfer RNA biogenesis [BR:
sbia03016
]
133509534 (xpo1b)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133509534 (xpo1b)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133509534 (xpo1b)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133509534 (xpo1b)
Pre-60S particles
133509534 (xpo1b)
Transfer RNA biogenesis [BR:
sbia03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133509534 (xpo1b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133509534 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BID
BspA_v
Motif
Other DBs
NCBI-GeneID:
133509534
NCBI-ProteinID:
XP_061692618
LinkDB
All DBs
Position
12:complement(16313321..16346477)
Genome browser
AA seq
1074 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLHHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGTLIEIRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGMGGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITTEIPQIFDAVFECTLNMINKN
FEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTMLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ITTALNPASPANNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRD
FLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggacatcaacctgctggataatgtggtaaactgtctacatcatggggtggga
ccacagcaaagaatggcacaagaagtgttaacgcatctcaaagagcacccagatgcctgg
acaagagtggacaccatcctggaattctcacaaaacatgaacaccaaatactatgccctt
cagatcttggaaactgttatcaaaacacgatggaaaattcttcccaggaatcaatgtgaa
gggataaaaaagtatgttgttgggctcattattaagacatcatctgatgctgcaaatgtg
gagaaagaaaaagtctacattggaaagctgaatatgattcttgttcagatcttgaagcag
gagtggccaaagcactggcccacattcatcagtgacattgtcggagcaagtcgaaccagc
gagagtctttgtcagaacaacatggtcattctcaaactgcttagcgaggaggtttttgac
ttctccagtggccagatgacccaggtcaaagccaaacatctgaaagacagtatgtgcaat
gaattctcccagatattccagctttgccagtttgttatggaaaattcccagaatgctccc
ctggtccatgctactctggagacactcttacgtttccttaactggattcctctgggctat
atctttgaaaccaagcttatcagcacgttagtgtataagttcctgaacgtcccaatgttt
cgcaatgtgacactgaagtgtttgacagaaattgctggagtaagcgtcagccagtacgag
gagcagtttgttacactcttcactctgacaatgtgtcagctcaagcagatgcttcccctc
aacactaatatccgactggcctatgccaatgggaaggatgatgagcagaactttatccag
aatctcagtctgttcctctgtactttcctgaaagagcatgggacgcttattgaaatacga
cttaacctgagagaaactttaatggaggcactccactatatgttactggtgtcagaagtg
gaagagactgagatctttaaaatttgtctggaatattggaaccacctggcggccgagctc
tacagagagagtcccttctccacatccacatcaccgttgctgtctggcaaccagcacttt
gacgtgccaccacgcaggcagctctacctgcccgtactgtccaaggtgcgtctgctaatg
gtgagccggatggccaaaccagaggaagtactggtggtggagaacgaccagggggaagtg
gtcagagagttcatgaaggatacagattccataaacctctacaagaacatgagggaaaca
cttgtgtacctgactcacttggactatgcagacacagagcgcataatgactgagaagctt
cataatcaggtgaatggtactgagtggtcctggaagaatctcaacacattgtgttgggca
attggatccatcagtggggcaatgcacgaagaggatgaaaagaggttcttggtcacagtc
attaaggatctgctaggtctgtgtgagcaaaaaaggggaaaggacaacaaggccattata
gcttcaaacatcatgtacattgtcggccagtatcctcgctttctcagagcccactggaag
ttccttaaaacggttgtcaacaagctctttgagttcatgcacgagacccatgatggtgtt
caagacatggcatgtgacacattcatcaagatcgcccagaagtgccggcgccacttcatc
caggtgcaagttggagaagtgatgcctttcattgatgagatcctcaacaacatcaacacc
atcatctgcgacctacagccacagcaggtccacacattctatgaagctgtaggttatatg
atcggcgctcagacagaccaggctgtgcaggaacatcttatcgagaaatacatgttactg
ccaaatcaagtgtgggacagtatcatccagcaggctaccaagaatgtggacattttgaag
gacccagagactgtgaaacaactgggtagcatcctaaagaccaatgtcagagcctgtaag
gccgtcggacacccatttgtcatccaactgggacggatttacctcgacatgctcaatgtg
tacaagtgcctcagcgagaacatatctgctgccattcagacaaatggtatgggaggagag
atggtgaccaagcagcctctaatcaggagcatgaggacagtcaaacgagagaccttgaaa
ctgatttccggctgggtcagccgatctaacgatccacaaatggttggggagaactttgtt
cccccgctgctagacgcagtcctcatcgactatcaacgcaacgtcccggctgcccgcgag
cctgaggttctaagcaccatggcaactatagtgaacaagctggggggacacatcaccact
gagataccccaaatctttgacgcagtcttcgagtgcactctaaacatgatcaacaagaat
tttgaagagtatcccgagcaccgaacccacttcttctacctgctccaagctgtcaactca
cactgcttccctgcgttccttgccatccccccagcccagttcaaactcgtgctggactca
atcatctgggccttcaaacacaccatgagaaatgttgctgacactggtctgcagattctc
tacacaatgcttcagaatgtggctcaagaggaagccgcagctcagagcttctaccagaca
tatttctgtgatatccttcagcacatcttctctgtggtcacggatacgtctcacacagct
ggtctgaccatgcacgcttccatcctggcctacatgtttaacctggtggaggagggcaag
atcaccactgcactgaaccccgcctctcctgccaacaaccaggttttcattcaggagtac
gtggccaacctgctcaagacggccttccctcatctgcaggatgctcaggtgaaggtgttt
gtaactggactgttcagcctcaaccaggacattcctgccttcaaggagcaccttagggac
ttcctcgtccagattaaggagttcgccggcgaggacacgacagacctgttcctggaggag
agggaagcatcgcttcgtcaggctcaggaggagaagcacaaaatccaaatgtcggttcca
ggcatcctcaacccacacgagatcccagaggagatgtgtgactga
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integrated database retrieval system
