Syngnathoides biaculeatus (alligator pipefish): 133514218
Help
Entry
133514218 CDS
T09681
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133514218 (scn4ab)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
133514218 (scn4ab)
BRITE hierarchy
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
GPHH
Motif
Other DBs
NCBI-GeneID:
133514218
NCBI-ProteinID:
XP_061701700
LinkDB
All DBs
Position
16:complement(25280077..25296520)
Genome browser
AA seq
1664 aa
AA seq
DB search
MRRKIAFLDFWGSKKEEQPLVRQPLPSELRKLLDNGALRAQLQNTKMVTLLPPIGTEVFR
KFTPVSLEEIQRCRQVKEKEPHRKEDENILVTEAQRNAIGELESGKPLPFIFGDPPLEFV
STPLEELDPFYQTQKTFIVLDGRKIIHRFNSAPACFLLTPLNHVRTAAIKILLHFFFQAF
ILMTVLANCAFMTMAKPPEWSGVVKSTFICIYAFEVIVKVAARGFCLGQFTFLRDPWNWL
DLMVIGTAYLTNVVDSETVSALQALPALKAITAIPGLKTTVSLLLQTVKKMAHVTALSLI
CLTVLAVLSLHIFMGYLKQKCVLMPPSNHSLDYFDFQEYINNPVNYYYQPGSIDALLCGN
SSEAGICPEGYTCMRGGPNPNYGYTSYDSFGWAFLAMVRLMTQDFWENLFQLTLRSAGKT
YTILFVVDLVVGSFSLVSLIVAVMALVSVEEKQVEMAEARQKDKEYAHILKILKKKVQEV
PGTACLTKKQHSSADMEECEEEQRPCLPCCSTFTNIFLKWTCCSSCWAQQRLHHFVTDPF
FDLAIVVCLVLNIIFMAMVHYPLTQEFAELLTIAELVFTGVFTAEMALKLLAMGPHFYFK
VGWNIFDSIIVILTVLELGLENIYGLKLLRVFRLAKWWPAFSALLKLIGKSLGTLKRFTL
LMAIVCFTFAVVGMQLFGKNYKENVCRISEDCTLPRWHMSDFFHSFLTIFRALYGEWIET
MWDCMEVSGQPACLIFFTMMVVVGKLMGVNLFLALLINSSNGDVWGDSEGERQNNLLIAL
NRIKSWALERTGKKTGRKTQSRIDLNPPVLGLKSEEESHKELLPLTFVSSEEPESEVKVV
GYNKPYKTASQASGNEAADEKKDLHHGESPECVCKRDEGNTPPKCFGDGCYQSCPVLNMD
SCRNGLRIWMNLRRSCMSVVEHTCFEAFITFVILLSSVALAIEDIHLERRPLIRSILQYA
DQVFTCIFVLEMLLRWFSGGFKKYFTDAWRCLDFLIVLISLVSTTVDVLVISNVRAINSL
RSLRPLRVLSRFEGTKVVGSTLFGAIPPILDVLLVCSTYWLIFSIMGVTLFAGKFYHCIN
DTSEELFHTQDVNNRTDCLMLMEQNWTEVRWSNLKINFDSVAIAYVSLLQVATFKGWLDL
IYAAMDSRQIEMQPEYEANVYMSLYFVFFIIFGGFFTLNFLVGTIIEYLKQQKAKLGGTG
LFMTKEQMKCYNSRKAIDLGKARKSVPRPQNKIQALLFDLVTKRSFDVLFTAFACLQLVV
MTTETWDQSFEKETILFWIYFAFIVIFLAECVMKIIALRRHYFSFRWNIFDFVLVIWSIL
GLFLTDLLEKYFIHPGPLIIVIRLTRVIRILHLFRFSKGVRRLLYALMRSLPALFNIGLF
LSVMMFIFAVFGMKNFAYVKKGALLDDMFNFETFGNSIICLLTITTTAGWDGLLFPIMRT
PPDCDPDMENAGTSVVGDCGSPVVGVIFCVSYITLSFLVVVNMYLVVILENFNVASEENA
DEVCESDIEMFCETWERFDPHVSHYIHYSQLSEFCDNLKDPLRIPKPNSIKVISMDLPLA
YGDKIHCLDLLVALTAQVLGISGETDNLRATMEEKLLACSTFKVMGSFQPVSSTLRRKRE
DIAATVIQRAYRKHATAKTGEANRIICHDGDEEESVQARLAGLL
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaaaaatagcatttctggacttttgggggagtaaaaaggaggaacagccactg
gtgaggcagcctttaccttcagagctgaggaagttgctagacaacggtgccctgcgagca
caactgcagaataccaagatggtgactctactgccccctattggtacagaggtcttccgt
aagtttacgccagtctcactggaggagatacaaagatgccgacaagtcaaagaaaaggaa
ccacacagaaaagaagatgagaatatcctggttaccgaagcgcagcggaatgcaataggc
gaattggaaagtgggaagcccctcccgttcatctttggtgatccacctctcgagtttgtc
agcaccccactggaggaactggatcccttctaccaaacacagaagacgttcattgttttg
gatggaagaaagatcatccacagatttaattctgctcctgcttgtttcctgctgactcct
ttaaaccatgtgaggaccgctgccatcaagatcctcctccacttctttttccaagctttt
atcctgatgacagttttggcaaattgtgccttcatgacaatggccaaacctccagagtgg
agtggagttgtcaaatccacttttatctgcatctacgcgtttgaggtgatcgtcaaagtt
gcggctcgaggtttctgtctcggtcagttcaccttcctcagggatccgtggaactggttg
gatttgatggtcatcggcacggcatacctgacaaatgtggtggattcagaaactgtttct
gcactacaagcccttccagcactaaaggccatcacagcaatacctggtttaaagacaaca
gtcagcttgctcttgcaaacggtaaagaagatggcccacgtgaccgccctgagcctcatc
tgcctcactgtactagctgtgctttcgctgcatatcttcatgggctacttgaagcaaaaa
tgcgtgctgatgccgccaagcaaccactcattggattactttgattttcaagagtacatc
aacaatcctgtcaactattattatcagcctggaagcatcgatgctttgctgtgcggaaac
agttctgaggctgggatctgtccagagggctatacttgtatgaggggggggcccaaccca
aattatggctacacaagctatgattcctttggttgggctttccttgctatggttagattg
atgactcaggacttctgggagaatctttttcaattgacattgcgctctgctgggaaaacg
tacaccatcttattcgtggttgaccttgtggtgggctctttttccctcgtaagcctcatt
gtcgcagtgatggccttggtgtctgtggaagagaagcaggtggagatggctgaggccagg
cagaaggacaaagagtatgctcacatattaaagatactgaagaaaaaagtgcaggaggtg
cctggcactgcttgcctcaccaaaaagcaacattcatcagcagatatggaagagtgtgag
gaagagcaaaggccctgtttaccgtgttgctccactttcaccaacatctttctcaagtgg
acctgttgcagcagttgttgggctcaacagcgactccaccattttgtcacggaccccttc
tttgaccttgctattgtcgtgtgccttgtgctgaacatcattttcatggccatggtgcat
tatcccttgacgcaagagtttgcagagctgctcacaatcgcagagctggtcttcacagga
gtttttacagcggagatggcactaaaacttctggccatgggtccccacttttacttcaag
gttggttggaacatttttgacagcatcattgttatcttgactgtgctggagttgggactg
gaaaacatttacgggctgaaactgctccgtgtgtttaggttggccaagtggtggccagcc
ttcagcgcccttctaaagctcattggaaagtcgttggggactctgaagcgtttcacgctg
cttatggccatcgtctgcttcacatttgctgtggttggaatgcagctgttcgggaagaac
tacaaagaaaatgtgtgccgcatatcagaagactgtacgcttcctcgctggcacatgagc
gatttcttccactccttcctcacgatcttccgagctctttacggagagtggatcgagaca
atgtgggactgcatggaagtttcgggtcagcccgcctgccttatcttcttcacaatgatg
gtggttgttggaaaactcatgggtgtgaatctgttcctggctttgttaataaactcatca
aatggagatgtttggggtgactcagagggagaaagacaaaacaatctattgatcgccttg
aatcggatcaaatcctgggccctggagcggacaggcaagaagacaggaaggaagacccaa
tccagaatcgatctaaaccctcctgtattaggacttaagagtgaagaggagagccacaag
gagctcttgccgcttacttttgtaagctcagaagagccagagtcagaggtcaaggtcgtt
ggctataataaaccctacaaaactgcttcccaagcatcaggaaatgaagctgctgatgaa
aaaaaagatttgcatcatggcgagtcaccagagtgcgtgtgcaaacgtgatgagggaaac
acccctcccaagtgcttcggtgacgggtgttaccagtcctgtccagtcttgaacatggac
tcctgccggaacggactacgaatctggatgaatttgagacgatcctgtatgtctgtggtt
gaacacacatgttttgaagccttcattacttttgtgatcttgctgagtagtgtagcacta
gcaattgaagacatccatctggagaggcgaccgctgatcaggagcattttgcagtacgcc
gaccaggtgttcacgtgtatctttgtgctggagatgcttttgaggtggttctctggagga
ttcaaaaagtactttaccgatgcttggcgctgcctagatttcctcattgtgcttatttct
ctggtttccacgactgtcgacgttcttgtaatttccaatgttcgagccatcaattctcta
agaagcctccgacctctgagggtcttgtctcgctttgaaggcacgaaggtggtgggatca
acgctgtttggagccatcccacccatcttggatgtattgctcgtttgttccacttactgg
ttgatttttagcatcatgggagtgacattgtttgcaggaaagttttatcactgcataaac
gacacttcggaagagttatttcacacccaagacgtcaacaacaggacagattgtctcatg
ctgatggagcaaaattggactgaagtgcgctggagcaatctcaaaatcaattttgacagt
gtggccattgcttacgtctcgcttctgcaagtggcgacttttaagggctggctggacttg
atctatgcagcgatggactccagacagattgagatgcagccagagtacgaggccaacgtg
tacatgtccctatattttgtcttttttatcatcttcgggggcttcttcaccctcaacttt
ctcgtcggcaccatcattgagtacctcaagcagcagaaagcaaagttgggaggaacaggt
ctgttcatgaccaaggaacagatgaaatgttataattccaggaaggccatagaccttggg
aaagcccggaagtctgttccccggccgcaaaataagattcaggcgctgcttttcgacctt
gtgacaaaacgctcctttgatgtactcttcacggcgtttgcttgcctccaattggtcgtc
atgacgactgaaacctgggaccaaagctttgaaaaggaaacaattttattctggatctac
tttgccttcatagtcatcttcttagcagagtgtgtcatgaagatcattgcgctgcgacgg
cattacttttcatttagatggaacatctttgacttcgtgctggtcatctggtctattttg
ggtttgtttctgacagacttattggaaaagtacttcatccatccgggtccactcatcatt
gtgattcgattgactcgtgtcatccgaatccttcatctcttccgtttttccaagggcgta
cgaagactcctctacgctttgatgaggtcacttcctgcactttttaacattggactcttc
ctctccgtcatgatgttcatattcgcagtttttggcatgaaaaactttgcttatgtgaag
aaaggagcgttgcttgatgacatgtttaactttgagacatttgggaacagcatcatttgt
ttgttaacgatcaccacaaccgccgggtgggacggtttgctctttcccatcatgagaact
ccaccagactgtgatcccgacatggaaaatgctgggacatctgttgtgggagactgcggt
agtccagtggtgggcgtcatcttctgcgtgtcctacattaccctgtctttcctggttgtg
gtcaatatgtaccttgtcgtcattttggaaaacttcaatgtggcttccgaggagaacgcc
gacgaggtctgcgagtccgacattgagatgttttgcgaaacctgggagaggtttgaccca
cacgtgtcacactatattcactacagccagctgtcggagttctgtgataatctgaaagat
ccactgaggattcccaaaccaaatagtatcaaggtgatcagcatggatttgcctctggca
tatggagacaagatacactgtctggacctcttagtggccctcactgcgcaggtactggga
atttcaggagaaacggataatctaagagccaccatggaggaaaagttactggcctgcagc
accttcaaagttatgggatcctttcaaccagtcagcagcactctgagaaggaagcgagaa
gatatcgctgcaactgtcatccagagagcgtaccggaaacacgcgacagccaaaacggga
gaggccaatcggatcatttgtcatgacggagatgaagaggagtcggtccaggcgcgcctt
gctggtctgctgtga
DBGET
integrated database retrieval system
