Sphingomonas bisphenolicum: SBA_ch1_03230
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Entry
SBA_ch1_03230 CDS
T08354
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SBA_ch1_03230 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbin01007
]
SBA_ch1_03230 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbin03016
]
SBA_ch1_03230 (lysS)
Enzymes [BR:
sbin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SBA_ch1_03230 (lysS)
Amino acid related enzymes [BR:
sbin01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SBA_ch1_03230 (lysS)
Transfer RNA biogenesis [BR:
sbin03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SBA_ch1_03230 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BBF68123
LinkDB
All DBs
Position
1:complement(337437..339017)
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AA seq
526 aa
AA seq
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MTMSDIIRTAATASKAWPYEEARKLLKRYASGAPDKGHVLFETGYGPSGLPHIGTFNEVL
RTTMVRNAFHALSDIPTRLVAFSDDLDGFRKVPDNVPNQAMLSEYLGKPLTQVPDPFEKF
ESFAHHNNAMLRDFLDSFGFDYEFVSATEQYQAGAFDEALRQVLRRYQAIMDIMLPTLRK
ERQATYSPVLPISPKSGIVLQVPVEVIDAEAGIVRFVDDGETIEQSILGGAAKLQWKVDW
AMRWYALGVDYEMAGKDLIDSVTQSSKICRALGGRPPEGFNYEMFLDEKGEKISKSKGNG
LSLEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRGNYSKQAIEQQLGNP
VHHIHDGKLPQGELPVTFGLLLNLVGVMGDASREQVWSYLQNYVPGASAQTYPELDALIG
HALAYHRDFVAPTLKRRAPDANEAAALRRLDAELAALPEGASAEDIQNIVYAIGKDEAFG
FAELRDWFKALYQTLLGADQGPRMGSFIALYGIENSRTLIAQALAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtccgacatcatccgcaccgccgcgaccgcctccaaggcctggccctatgaa
gaagcccgcaagcttctgaagcgctatgccagcggcgcgccggacaagggacatgtcctg
ttcgagaccggctatggtccgtcgggcctgccgcatatcggcaccttcaacgaagtgttg
cgcacgacgatggtgcgcaacgccttccacgcgctgtcggacattcccacccggctggtg
gcgttcagcgacgatctggacgggttccgcaaggtgcccgacaatgtgccgaaccaggcg
atgctgagcgaatatctgggcaagccgctgacgcaggtgcccgatccgttcgaaaagttc
gaaagcttcgcgcatcataataatgcgatgctgcgcgactttctcgacagtttcggcttc
gactatgaattcgtctctgcgacagagcaatatcaggctggcgctttcgacgaagcgctg
cgccaggtgctgcgccgttatcaggcgatcatggacatcatgctgccgaccctgcgcaag
gaacggcaggcgacctattcgccggtcctgccgataagcccgaagagcggcatcgtgcta
caggtgccggtcgaggtgatcgacgccgaagccggcatcgtccgcttcgtcgatgacggc
gagacgatcgaacaatcgatcctgggcggcgcggccaagctgcaatggaaggtcgactgg
gcgatgcgctggtatgcactgggcgtcgattatgaaatggcgggcaaggatctgatcgat
tcggttacccagtcgtccaagatttgccgcgcgctcggcggccgcccgcctgaaggcttc
aactacgagatgttccttgacgagaagggcgagaaaatctccaagtccaagggcaatggc
ctcagcctcgaacaatggctgacctacggcccgcaggaaagtctggccttctacgcctat
cgcgagccgaagaaggcgaagcagctccacatgggcgtcatcccgcgcgcagtggacgaa
tattggcagttccgcggcaattattccaagcaggcgatcgagcagcaactcggcaatccg
gtccatcacatccatgacggcaagctgccgcaaggtgagttgccggtgaccttcggcctg
ctgctgaacctcgtcggcgtgatgggcgacgccagccgggagcaggtctggtcctatctg
caaaattacgttccgggggcgagcgcgcaaacctatccggaactggacgcgctgatcggc
catgcgctggcctatcatcgcgatttcgtcgcgccgacgctcaagcgccgtgcgcccgac
gccaatgaggcggctgcgctgcgccggttggatgccgaactggctgcgctgccggaaggc
gcatcggccgaggatatccagaatatcgtctatgccatcggcaaggacgaggcgttcggc
ttcgccgagctgcgcgactggttcaaggcgctctaccagacgctgctgggcgccgatcag
gggccgcgcatgggcagcttcatcgcgctgtacggtatcgagaacagccggacgctgatt
gcgcaggcgctcgccgcctga
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