Shewanella bicestrii: CF168_06365
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Entry
CF168_06365 CDS
T05197
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00730
Thiamine metabolism
sbj01100
Metabolic pathways
sbj01240
Biosynthesis of cofactors
sbj04122
Sulfur relay system
Module
sbj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CF168_06365
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CF168_06365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbj03016
]
CF168_06365
Enzymes [BR:
sbj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CF168_06365
Transfer RNA biogenesis [BR:
sbj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CF168_06365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
DUF4621
Motif
Other DBs
NCBI-ProteinID:
ASK68525
UniProt:
A0A220UK79
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All DBs
Position
1453550..1455004
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIWVKVPNDKPE
LAQAFGERLACIPGIAHVVQVDEYSFTSVDDIYQQVLPVYRDQIAGKTFCVRVKRTGSHD
FNSIEVERYVGGGLNQFTDAIGVRLKNPEVTVNLEIEGDKLYMVTKRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERMGIQAIVTGESLGQVSSQTL
TNLNVIDRCTDMLILRPLIAMDKQDIINECRRIGTEDFAKSMPEYCGVISQKPTVKAVLA
KVEAEETKFSEDLIDRIVEQAVAIDIREIAEQMNTRITETETVVAIDTNEVVIDIRAPEE
EENKPLEIEGVEIKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYHNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtacccagaaatcatgatgaagagcaagcccgtgcgcatg
cgcttcaccaaaatgcttgaaaccaacatccgtaacgtgctcaaaaaagttgatgaagat
gccaaagtgcaacgtcaatgggaccgtatttgggtaaaggtgccaaatgataaacctgaa
ttagctcaggcctttggtgagcgtttagcctgtattcctgggatcgcccatgtggtgcaa
gtggatgaatacagctttacctcagtcgacgatatctaccagcaagttttacccgtatat
cgtgaccaaattgccggtaaaaccttctgtgtgcgcgtcaaacgtactggctcccacgat
tttaactctatcgaagtcgagcgttatgtcggtggtggtttaaaccagtttaccgatgcg
attggcgtgcgtttaaagaacccagaagtgacagttaacctcgaaatcgagggcgataaa
ctgtatatggtgaccaagcgtatcgaaggcttaggcggcttcccaatggcgacacaggaa
gatgtgttgtcgttgatttcgggcggttttgactcaggcgtgtcgagctaccaatttatt
aagaagggcgctcgtacccattactgtttcttcaacctcggcggcgcgcagcatgaaatt
ggcgtgaaacaagtcgcttaccatttgtggaaaacctatggtgaatcccacaaggtgaag
tttgtgtccgtgccgttcgagcctgtagtggccgagattttagagaaaatcgacaacggt
caaatgggcgtggtgctcaagcgtatgatgatgcgcaccgcggcgcgtattgccgagcgt
atgggcattcaggcgattgtcacaggtgagagtttaggccaagtatcgagccaaacctta
accaacttaaacgtgattgaccgctgcacagatatgctgatcctgcgcccgctgatcgcc
atggacaagcaggacatcatcaacgaatgccgccgtatcggcaccgaagattttgcgaaa
tctatgcccgaatattgcggcgtgatttcgcaaaagccaaccgtgaaggcggtactggct
aaggttgaggctgaggagactaaattctctgaggacttgattgaccgtatcgttgagcag
gccgtggccattgatatcagggagatagcagaacaaatgaatacgcgtatcactgaaact
gaaaccgttgttgctatcgacaccaatgaagtggtgattgatattcgcgccccagaggaa
gaagagaacaagccgctggagattgaaggcgtggaaatcaagcggatccctttcttcaaa
ttagcgactcagtttgccgatctcgataagcagaagacttacctgttgtactgtgagcgt
ggtgtgatgagtaaattacaggcgctatacctgattgagcaaggttatcacaatgttaag
gtttaccgcccttaa
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