Shewanella benthica: SHEWBE_2224
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Entry
SHEWBE_2224 CDS
T06707
Symbol
mnmC
Name
(GenBank) tRNA (mnm(5)s(2)U34)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbk03016
]
SHEWBE_2224 (mnmC)
Enzymes [BR:
sbk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
SHEWBE_2224 (mnmC)
Transfer RNA biogenesis [BR:
sbk03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SHEWBE_2224 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
SipA
Methyltransf_30
Pyr_redox_2
Pyr_redox_3
FAD_binding_2
NAD_Gly3P_dh_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
SQH76190
UniProt:
A0A330M567
LinkDB
All DBs
Position
SHEWBE:complement(2088526..2090664)
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AA seq
712 aa
AA seq
DB search
MTQEREEKMVNSRICSHFDSFYEQIARMYPDKKKLSLGQIGLCDVQQMLSVIILQQKSMA
DTRFYVKVFEADYSAIERINLQLVALQTQYQKGQACQEPAHTDLGSRSGFDSDLASEYES
SSCLDRQAAIKQLIDAKLVAIPGCQRLILNQGRCLIDLYLGDIHSSLSNTLAPAYQASYI
HAWLHTSDKHSLDEQTLWQMAKLSSNAAMLSSSNMSQQQVNLAQIAGFTLTDISSTDASL
KDCLLDARAAEKTSPSPASAQLNDEISQQERQALRQAQANGFQHYPQLPAKEGEIAVIGG
GIASTHLALSLAERNKSVRLFCQDEAFSQQASGNKQGAIYPLLTPDNGTLSQYFQQGLLF
TRRRLTTLIDEGFNIANELCGVLHTGHDERSRGRINRIISAQAWPKEIAHRVSAQEASNL
ASIDIDQEGVFYPLGGWISPPDFTQAAFDKASQIADVSALFNCNITRIEQSQGQWYLYQN
ADAHSENGSVNEVKHGPFSTLVLANGRGLTQFEQSKLLPATGFRGQVSHIPARNELAKLT
TVLCSHGYLTPSNDQLHCTGASYVKDPEHLDYCPNEQLDNLKKMQHSFENKAWVDDIDIT
GHSARVGVRMVTRDHAPMLGCAPDTHVMLENYQLHQHTKASIKFWKDNPAPIHHGLFILG
GLGSRGITTGPLAAEALASQLCGEIIPLDMATLALLNPNRMWMRKLIKGKAL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaagaacgtgaagaaaagatggtaaatagccgtatttgtagtcatttcgactca
ttttatgagcaaatagctagaatgtatcctgacaaaaaaaaattatcattagggcaaata
ggactctgtgatgtacagcaaatgctatctgtcatcatattacaacaaaagtccatggca
gatactcgattttatgtgaaggttttcgaagctgattactcagccattgagcgcataaat
ctgcaactcgtcgcacttcaaactcaataccaaaagggccaagcgtgtcaagaaccggcc
cataccgatttaggctctcgttctggcttcgattctgatttagcgtctgaatatgagtct
agctcatgtttagataggcaagctgccattaaacagcttatcgatgccaagctagtggca
ataccgggttgccagagactgattttgaatcaaggacgttgcctcatcgacctgtatctc
ggtgatatacattcaagtttaagcaacaccttggcgcctgcataccaggcatcttatatc
catgcctggctgcacacctcagataaacactcactggatgagcaaacattatggcagatg
gccaaactcagcagtaacgccgccatgctatcaagctcgaacatgagccagcaacaggtt
aacttagcccaaatagccggctttacgctaacggacatttcttcaacagacgcttcttta
aaagactgtttattagacgctagagcagcggaaaaaacctctccctccccggcatcggct
cagttaaatgacgagatatcccagcaagagcgacaggcgttaagacaagctcaggccaat
gggtttcagcactatcctcagttaccggcaaaagagggagaaattgctgttataggtggt
gggattgccagtactcatcttgcgctatccctggcggagcgaaataaaagcgtgcggctt
ttttgtcaggatgaggcctttagccaacaagcttcaggcaacaagcaaggcgcaatttat
cccctactcaccccggacaatggcacccttagccaatattttcagcaaggtttactcttt
acccgaaggcgattaaccaccctgatcgatgaaggctttaacatcgccaatgaactttgc
ggtgtgttgcatactggccacgatgaacgtagccgtggcagaatcaaccgcatcatctcg
gctcaggcttggccgaaggaaatagcccacagggtatctgcacaagaagccagcaacctc
gccagcatagatatagaccaggaaggtgtgttttatccattaggtggctggataagtccg
ccagactttacccaagccgctttcgataaagcgagccaaattgccgatgtcagcgcctta
tttaactgtaacatcacccgtatcgagcaaagccaaggtcagtggtacctgtatcagaac
gctgacgctcattcagaaaatggatcagtgaatgaagttaaacatggtcccttcagcacc
ttagtgctggctaatggccgtggattaactcagttcgaacagagtaaactcctgccggca
accggattcaggggtcaagtcagtcatattcctgcccgcaatgagttggcaaagctcact
acggttctgtgctcccacggctacctgacaccgagcaatgaccagcttcattgcacaggt
gcaagttacgttaaagacccagagcatctggattactgtcctaacgagcagctagataac
cttaaaaagatgcagcacagtttcgaaaacaaggcatgggtcgacgatatagatatcacc
ggacacagtgccagagtcggcgtgcgtatggtcactcgggatcatgcgcctatgctgggc
tgcgcccccgatacccatgtaatgctagaaaattaccagctgcatcaacatactaaggcc
agcatcaagttctggaaggataatccggcccccattcatcatggcctgtttattttgggt
ggattgggttcgaggggaattaccacaggaccactggctgccgaagccctagcttctcaa
ctttgcggggagataataccactggatatggctacgttagccctgcttaaccccaatcga
atgtggatgcgtaaactgattaaaggtaaggcactttag
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