Shewanella benthica: SHEWBE_2402
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Entry
SHEWBE_2402 CDS
T06707
Symbol
ycbY
Name
(GenBank) Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase; 23S rRNA m7G2069 methyltransferase]
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbk03009
]
SHEWBE_2402 (ycbY)
Enzymes [BR:
sbk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
SHEWBE_2402 (ycbY)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
SHEWBE_2402 (ycbY)
Ribosome biogenesis [BR:
sbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SHEWBE_2402 (ycbY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_15
THUMP
Met_10
PrmA
N6_N4_Mtase
TRM
Methyltransf_3
Spermine_synth
N6_Mtase
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
SQH76365
UniProt:
A0A330M2W4
LinkDB
All DBs
Position
SHEWBE:2266029..2268164
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AA seq
711 aa
AA seq
DB search
MLNFFAAAPRGYEYALSLELAELGASEIKESVAGVYFSASLELGYRITLWSRLASRIIFV
IHKGPCESPEQLYNAAYGIDWQMQFSNRSTFSVDFHGQGGFINNTMYGALKIKDAIVDRF
RDDDFSRPDVSRHDADFRIDAHYRRGEITIGLNFSGPALHKRGYRSTTGEAPLKENLAAN
MLVRSGWQKEQVSLLDPFCGSGTILIEAAMMACDIAPGLHRERFGFEHWLRHNDKHWQEL
LNEARARASIGITRCSTKFYGSDIEPHLISIAKQNAENAGVSDLIEFNVSDVLELKVPEA
SGYLISNPPYGERLGTVTELLQLYYQLGDKFKAEFGGWKIAMLNSDKELLSALKLKADKQ
MKMSNGPLDCAFNLYTVHAENTRRVDPENIKRDGDVSDIAVPFANRIKKNYKQLKKWAKK
EGIDSYRIYDADLPDYKVAIDKYLDYVVIQEYTAPMDIPESVTKRRLTDVLIALPSAIGI
DPKNIILKKRERQKGSNQYQKLSTTKLEVITTEYDAKFKLNLKEYLDTGLFLDHRLTRKL
VGEKSNNRDVLNLFAYTGTASVHAALGGAKTVTTVDMSNTYISWAKENFALNGLNDNKYS
FVQADCLTWIKRTRDTYDFIFIDPPTFSNSKRMEDSFDVLRDHVALLTDLIKILRPGGEI
IFSNNKRKFKMEIAALEAVGIKVENIDNQTLPMDFKRNPQIHNTWLLTHAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttttttgctgcggctcctaggggctatgaatatgcgttatcacttgagtta
gctgaactcggtgcctctgaaattaaagagagcgtggcgggtgtctactttagcgcatct
ctcgagctgggttatcgaattacgctttggtcacgtttggcgagtcgaatcattttcgtt
atacataaaggaccatgcgagtcacccgagcagctctataatgctgcttatggtatagat
tggcagatgcagttttctaatcgcagcacatttagcgtcgatttccatggtcagggtggt
ttcatcaataacaccatgtatggtgcacttaagatcaaagatgccatcgtcgatcgtttt
cgcgacgatgatttttcaaggccggatgtctctcgccacgatgcagattttcgcatcgat
gcacactatcgtcgtggagagatcaccataggcttgaatttctccggccccgcactgcac
aagcgtggttatcgctcgaccacaggtgaggctcctttaaaagagaatcttgccgccaat
atgctggttcgtagtggctggcagaaagagcaagtttcactgctggaccctttttgtggc
agtggcactatcttgattgaagctgccatgatggcttgtgatattgcgccaggtctgcat
cgtgagcgctttggttttgagcattggctaagacataatgacaaacattggcaagaattg
ctcaatgaggcccgtgctcgagcctctattggcataacccgctgcagcactaaattttat
ggctcagacatagagcctcatctcatctctatcgctaaacaaaatgcagaaaatgccggt
gtgagtgacttaatcgaatttaatgttagcgatgtcttagagcttaaagtgccggaagct
agcggttatctgatcagtaaccctccctacggtgaacgtctgggtactgtaactgagctg
cttcagctctattatcagttgggtgataaatttaaggctgaatttggtggctggaaaata
gccatgttaaacagtgataaagagttgttgtctgccttaaagcttaaagccgataaacag
atgaagatgagtaacggtccactggattgtgcattcaatctctatactgtgcatgccgag
aatactcgccgcgtcgaccctgagaatatcaagagagacggtgatgttagcgatattgcc
gtgcctttcgctaatcggattaagaagaattacaaacaacttaagaagtgggctaaaaaa
gagggtatcgacagttaccgtatctatgatgccgatctacccgattacaaggttgccatc
gataaatatctggattatgtcgttatccaagaatataccgcgccaatggatattcccgag
tcggtgaccaagcgtcgtttgaccgatgtgcttatcgccttacctagtgcgattggtatc
gatcctaagaatatcatcttgaagaagcgtgagcgtcaaaagggcagcaatcaatatcag
aagctctcaacgactaagcttgaggttatcactactgaatatgatgccaaatttaagtta
aatcttaaagagtatctcgatacaggtctgttcctcgatcatcgtctcacccgtaaactc
gtgggcgaaaagtctaacaatcgcgatgtcctcaacctgtttgcctatacgggaacggct
tctgtacatgcagcactcggtggggctaaaacggttaccaccgtcgatatgtctaatacc
tatatcagttgggcgaaagagaactttgctttaaatgggctaaatgacaataagtattcg
tttgtacaggcagactgtttgacttggatcaaacgtacccgtgatacttatgacttcatc
tttatcgatccgccgacgttctcaaattcgaaacgcatggaagactccttcgatgtgtta
cgtgatcatgtggctttgctgactgacttgattaagatcctcaggccaggtggtgagatc
atcttttctaacaataagcgtaagtttaagatggagatagcagccctggaagctgttggc
attaaagttgaaaatatcgacaatcaaaccttacccatggattttaagcgtaacccacag
atccataacacttggctgctaacccatgccgagtaa
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