Shewanella baltica OS185: Shew185_0016
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Entry
Shew185_0016 CDS
T00571
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00071
Fatty acid degradation
sbm00280
Valine, leucine and isoleucine degradation
sbm00310
Lysine degradation
sbm00362
Benzoate degradation
sbm00380
Tryptophan metabolism
sbm00410
beta-Alanine metabolism
sbm00640
Propanoate metabolism
sbm00650
Butanoate metabolism
sbm00907
Pinene, camphor and geraniol degradation
sbm00930
Caprolactam degradation
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
sbm01200
Carbon metabolism
sbm01212
Fatty acid metabolism
Module
sbm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shew185_0016
00650 Butanoate metabolism
Shew185_0016
09103 Lipid metabolism
00071 Fatty acid degradation
Shew185_0016
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shew185_0016
00310 Lysine degradation
Shew185_0016
00380 Tryptophan metabolism
Shew185_0016
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shew185_0016
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shew185_0016
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shew185_0016
00930 Caprolactam degradation
Shew185_0016
Enzymes [BR:
sbm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shew185_0016
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shew185_0016
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shew185_0016
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Shew185_0016
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABS06189
UniProt:
A6WHA0
LinkDB
All DBs
Position
complement(20698..22848)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQDSNIKALVLTSS
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALK
VGAVDSVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKALIGIFLNDQFVK
GKAKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKLL
SAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSRGKP
KKDVDPTSYGLLKDAFGELKAFEADDIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRTLAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaaccctcgcctcgctcgat
gcggcattagacagcatcaagcaagattccaatatcaaagcgttagtgctgacctcaagt
aaagatacctttattgtgggcgccgacattaccgaatttttaggcctgttcgcacaagat
gacgccgtattgctctcttgggttgaacaagctaacgcagtcttcaacaaactcgaagac
ttgcctttcccaactgcatcagcaatcaaaggctttgccttaggtggcggctgtgaaacc
attctggcaaccgatttccgtatcgcagacaccacagccaaaatcggtttacctgaaact
aaactcggcatcatcccaggttttggcggcacagttcgtctgccacgtgtgattggtgca
gataacgcacttgagtggatcacgaccggtaaagaccaacgcgctgaagatgcactgaaa
gtcggcgctgttgattccgtggttgcaccacaagcgttagaagctgctgcgattcaaatg
ctgaaagatgctgttgctgaaaagctggattggcaagcacgtcgtaaccgtaaactgtct
gcgctaacactgccaaaacttgaagctatgatgtcattcaccacagccaaaggcatggtg
tttgcggttgcgggtaaacactaccctgcaccaatggctgctgtaagcgtaattgagcaa
gcatcgactaaaggtcgtgctgaagcattacaaatcgaacatcaagcctttatcaagctg
gctaaaactgacgtagctaaagcacttatcggtattttccttaatgatcaatttgttaaa
ggtaaagcgaagaaagccggcaagttagcgaaagaagtcaacaacgcggccgtattaggc
gcaggcattatgggcggcggcatcgcttaccaaagcgccagcaaaggcacaccgattgtc
atgaaagacattgcccagccagcattagatttaggcctcaatgaagccgctaaactgcta
tctgcccaagtcgcccgtggccgttcaacgccagaaaaaatggccaaagtgctgaacaac
atcacgccttcattagattatgccgcgattaaacacagtgatgtcgtcgttgaagccgtt
gttgaacatccaaaaatcaaagcacaggttttagccgaagttgaaggctatgtgagtgaa
gatgcaattatcgcgtcaaacacttcaacgatttcaatcaacttgctcgctaagagcatg
aagaaacctgaacgtttctgcggtatgcatttcttcaacccagtgcacaaaatgcctttg
gtcgaagttatccgtggcgagcatagctctgaagaaaccatcgcctctgttgtggcttat
gccagcaaaatgggcaagaccccaatcgttgttaatgattgccctggcttcttcgttaac
cgcgtactcttcccttactttgcaggctttaacggcttacttgccgaaggtggcgacttt
gctgcaatcgacaaagtgatggaaaaacaattcggttggccaatgggtccagcttacctg
ctcgacgtagtcggtttagacacaggtcatcacgcccaagctgttatggctgaaggtttc
cctgatcgcatgggtaaatcaggcactgacgcgattgatgtgatgtttgagaacaaacgt
cttggccagaaaaatggtaaaggtttctatgtctattcagtcgatagccgtggcaagccg
aagaaagatgtcgatccaacgagctacggcctattgaaagatgcctttggcgagttaaaa
gcctttgaagccgatgacattattgcccgtactatgatccctatgatcatcgaaaccgtg
cgctgtttagaagaaggtattgtcgcatcgcctgccgaagcggatatgggcctagtttat
ggcttaggtttcccgccattcagaggcggcgtgttccgttacttggataccatgggtgtc
gcaaattttgtggccttagcagacaaatatgctcacttgggcggtctgtatcaagtcaca
gatgcgatgcgcacattagcagccaataacggtagctactaccaagcctaa
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