Shigella boydii Sb227 (serotype 4): SBO_2035
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Entry
SBO_2035 CDS
T00301
Symbol
ycdW
Name
(GenBank) putative dehydrogenase
KO
K12972
glyoxylate/hydroxypyruvate reductase [EC:
1.1.1.79
1.1.1.81
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00260
Glycine, serine and threonine metabolism
sbo00620
Pyruvate metabolism
sbo00630
Glyoxylate and dicarboxylate metabolism
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
SBO_2035 (ycdW)
00630 Glyoxylate and dicarboxylate metabolism
SBO_2035 (ycdW)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBO_2035 (ycdW)
Enzymes [BR:
sbo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.79 glyoxylate reductase (NADP+)
SBO_2035 (ycdW)
1.1.1.81 hydroxypyruvate reductase
SBO_2035 (ycdW)
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Motif
Pfam:
2-Hacid_dh_C
NAD_binding_2
DUF551
Motif
Other DBs
NCBI-ProteinID:
ABB66619
ShiBASE_China:
SBO2035
UniProt:
Q31Z89
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Position
complement(2001861..2002838)
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AA seq
325 aa
AA seq
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MRINFAQRFSGVSMDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHP
PVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQV
LHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSR
TRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLAR
GVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVE
YISRTIAQLEKGERVCGQVDRARGY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaataaatttcgcacaacgcttttcgggagtcagtatggatatcatcttttatcac
ccaacgttcgatacccaatggtggattgaggcactgcgcaaagctattcctcaggcaaga
gtcagagcatggaaaagcggagataatgactctgctgattatgctttagtctggcatcct
cctgttgaaatgctggcagggcgcgatcttaaagcggtgttcgcactcggggccggtgtt
gattctattttgagcaagctacaggcacaccctgaaatgctgaacccttctgttccactt
tttcgcctggaagataccggtatgggcgagcaaatgcaggaatatgctgtcagtcaggtg
ctgcattggtttcgacgttttgacgattatcgcatccagcaaaatagttcgcattggcaa
ccgctgcctgaatatcattgggaagattttaccatcggcattttgggcgcaggcgtactg
ggcagtaaagttgctcagagtctgcaaacctggcgctttccgctgcgttgctggagtcga
acccgtaaatcgtggcctggcgtgcaaagctttgccggacgggaagaactgtctgcattt
ctgagccaatgtcgggtattgattaatttgttaccgaatacccctgaaaccgtcggcatt
attaatcaacaattactcgaaaaattaccggatggcgcgtatctcctcaacctggcgcgt
ggtgttcatgttgtggaagatgacctgctcgcggcgctggatagcggcaaagttaaaggc
gcaatgttggatgtttttaatcgtgaacccttaccgcctgaaagtccgctctggcaacat
ccacgcgtgacgataacaccacatgtcgccgcgattacccgtcccgctgaagctgtggag
tacatttctcgcaccattgcccagctcgaaaaaggggagagggtctgcgggcaagtcgac
cgcgcacgcggctactaa
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