KEGG   Shigella boydii Sb227 (serotype 4): SBO_2043
Entry
SBO_2043          CDS       T00301                                 
Symbol
putA
Name
(GenBank) proline dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo00250  Alanine, aspartate and glutamate metabolism
sbo00330  Arginine and proline metabolism
sbo01100  Metabolic pathways
sbo01110  Biosynthesis of secondary metabolites
Module
sbo_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    SBO_2043 (putA)
   00330 Arginine and proline metabolism
    SBO_2043 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbo03000]
    SBO_2043 (putA)
Enzymes [BR:sbo01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     SBO_2043 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     SBO_2043 (putA)
Transcription factors [BR:sbo03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    SBO_2043 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: ABB66625
ShiBASE_China: SBO2043
UniProt: Q31Z83
LinkDB
Position
2011959..2015921
AA seq 1320 aa
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGA
ANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPV
AEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT
RDALIRDKISNCNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSG
EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAY
MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA
RQYDIGINIDAEEADRLEISLDLLENLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLVDL
ATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI
YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY
APVGTYETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGL
PHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEM
SPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQ
MQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNF
PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGA
QLTGDDRVRGVMFTGSTEVATLLQCNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ
VVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVI
DSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELHKEVF
GPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVG
AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALT
QPLNALREWAANRPELQALCTQYGELAQAGIQRLLPGPTGERNTWTLLPRERVLCIADDE
QDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHG
DSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
NT seq 3963 nt   +upstreamnt  +downstreamnt
atgggaaccaccaccatgggggttaagctggacgacgcgacgcgtgagcgtattaagtct
gccgcgacacgtatcgatcgcacgccacactggttaattaagcaggcgattttttcttat
ctcgaacaactggaaaacagcgatactctgccagagctacctgcgctgctttctggtgct
gccaatgagagcgatgaagcaccgactccggcagaggaaccacaccagccattcctcgac
tttgccgagcaaattttgccccagtcggtttcccgcgccgcgatcaccgcggcctatcgt
cgcccggaaaccgaagcggtttctatgctgctggaacaagcccgcctgccgcagccagtt
gctgaacaggcgcataaactggcatatcaactggccgataaactgcgtaatcaaaaaaat
gccagtggtcgcgcaggtatggtccaagggttattgcaggagttttcgctgtcatcgcag
gaaggcgtggcgctgatgtgtctggcggaagcgttgttgcgtattcccgacaaagccacc
cgcgacgcgttaattcgcgacaaaatcagcaactgtaactggcagtcacacattggtcgt
agcccgtcactgtttgttaatgccgctacctgggggctgttgtttactggcaaactggtt
tccacccataacgaagccagcctctcccgctcgctgaaccgcattatcggtaaaagcggt
gaaccgctgatccgcaaaggtgtggatatggcgatgcgcctgatgggcgagcagttcgtc
acgggtgaaaccatcgcggaagcgttagccaatgcccgcaagctggaagagaaaggtttc
cgttactcttacgatatgctgggcgaagctgcactgactgccgcagacgcacaggcgtat
atggtttcctatcagcaggcgattcacgccattggtaaagcgtctaacggtcgtggcatc
tatgaaggtccgggcatttcaatcaagctgtcggcgctgcatccgcgctacagccgcgcc
cagtatgaccgggtaatggaagagctttacccgcgtctgaaatcactcaccctgctggcg
cgtcagtatgatattggtattaacatcgatgccgaagaggccgatcgtctggagatctcc
ctcgatctgctggaaaatctctgtttcgagccggaactggcaggctggaacggcatcggt
tttgttattcaggcttatcaaaaacgctgcccgttggtgatcgattacctggttgatctc
gccacccgcagccgtcgccgtctgatgattcgcctggtgaaaggcgcgtactgggatagt
gaaatcaagcgtgcgcagatggacggccttgaaggctatccggtttatacccgcaaggtg
tataccgacgtttcttatctcgcctgtgcgaaaaagctgctggcggtgccgaatctaatc
tacccgcagttcgcgacgcacaacgcccatacgctggcagcgatttatcaactggcaggt
cagaactactatccgggtcagtacgagttccagtgcctgcatggtatgggcgagccactg
tacgagcaggtcacagggaaagttgccgacggtaaacttaaccgaccgtgtcgtatttat
gccccggttggcacatatgaaacgctgctggcgtatctggtgcgtcgcctgctggaaaac
ggtgctaacacctcgtttgttaaccgtattgccgacacctctttgccactggatgaactg
gtcgccgatccggtcactgctgtagaaaaactggcgcaacaggaagggcaaactggatta
ccgcatccgaaaattcccctgccgcgcgatctttacggtcacgggcgcgacaactcggca
gggctggatctcgctaacgaacaccgtctggcctcgctctcctctgccctgctcaatagt
gcactgcaaaaatggcaggccttgccaatgctggaacaaccggtagcggcaggtgagatg
tcgcccgttattaaccctgcggaaccgaaagatattgtgggctttgtgcgtgaagccacg
ccgcgtgaagtagaacaggcgctggaaagtgcggttaataacgcgccaatctggtttgcc
acgcctccggctgaacgcgcggcgattttgcatcgcgctgccgtgctaatggaaagccag
atgcagcaactgattggtattctggtgcgtgaagccggaaaaaccttcagtaacgctatt
gccgaagtgcgcgaagcggtcgattttctccactactacgccggacaggtgcgggatgat
ttcgctaacgaaacccaccgtccattagggcctgtggtgtgtatcagtccgtggaacttc
ccgctggctattttcaccgggcagatcgctgccgcactggcggcaggtaacagcgtgctg
gcaaaaccggcagaacaaacgccgctgattgccgcgcaagggatcgccattttgctggaa
gcgggtgtaccccctggcgtggtgcaattgctgccaggtcagggggaaaccgtgggcgcg
caactgacgggtgatgatcgcgtgcgcggggtgatgtttaccggttcaaccgaagtcgct
acgttactgcagtgcaatatcgccagccgcctggacgctcagggtcgccctattccgctc
atcgctgaaaccggcggcatgaacgcgatgattgtcgattcttcagcactgaccgaacaa
gtcgtcgtggatgtgctggcctcggcgttcgacagtgcgggtcagcgttgttcggcactg
cgcgtgctgtgcctgcaagatgagattgccgaccacacgttgaaaatgctgcgcggtgca
atggccgaatgccggatgggtaatccgggtcgcctgaccaccgatatcggtccggtgatt
gatagcgaagcgaaagccaatattgagcgccatattcagaccatgcgtagcaaaggccgt
ccggtgttccaggcggtgcgggaaaacagcgaagatgcccgtgaatggcaaagcggcacc
tttgtcgccccgacgctgatcgaactggatgactttgccgaattgcacaaagaggtcttt
ggtccggtgctgcatgtggtgcgttacaaccgtaaccagctaccagagctgatcgagcag
attaacgcttccggctatggtctgacgcttggtgtccatacgcgtattgatgaaaccatc
gcccaggtcactggctcggcccatgttggtaacctgtatgttaaccgtaatatggtgggc
gcagtggttggtgtgcagccgttcggcggcgaagggttgtccggtaccgggccgaaagca
ggcggtccgctctatctctaccgtctgctggcgaatcgcccggaaagtgcgctggcagtg
acgctcgcgcgtcaggatgcagagtatccggtcgatgcacagttgaaagccgcattgact
cagccgctaaatgcactgcgggaatgggcagcaaatcgtccagaattgcaggcgttatgt
acgcaatatggcgagctggcgcaggcaggaatacaacgattgctgccggggccgacgggt
gaacgcaacacctggacgctgctgccgcgtgagcgcgtgttgtgtattgccgatgatgag
caggatgcgctgactcagctcgccgccgtgctggcggtgggcagccaggtactgtggccg
gatgacgcgctgcatcgtcagctagtaaaggcattgccatcggcagtcagcgaacgtatt
caactggcgaaagcggaaaatataaccgctcaaccctttgatgcggtgatcttccacggt
gattcggatcagcttcgcgcattgtgtgaagccgttgctgcgcgggatggagcaattgtt
tcggtgcagggttttgcccgtggcgaaagcaatatccttctggaacggctgtatatcgaa
cgttcgctgagtgtgaataccgctgccgctggcggtaacgccagtttaatgacgatcggt
taa

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