Shigella boydii Sb227 (serotype 4): SBO_2539
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Entry
SBO_2539 CDS
T00301
Symbol
gcpE
Name
(GenBank) conserved hypothetical protein
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00900
Terpenoid backbone biosynthesis
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
Module
sbo_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SBO_2539 (gcpE)
Enzymes [BR:
sbo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
SBO_2539 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
SBO_2539 (gcpE)
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GFIT
Motif
Pfam:
GcpE
DeoC
Motif
Other DBs
NCBI-ProteinID:
ABB67083
ShiBASE_China:
SBO2539
UniProt:
Q31XX5
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All DBs
Position
complement(2536408..2537526)
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AA seq
372 aa
AA seq
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MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR
VSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM
VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV
KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL
AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV
SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLD
EARRIDVQQVEK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcataaccaggctccaattcaacgtagaaaatcaacacgtatttacgttgggaatgtg
ccgattggcgatggtgctcccatcgccgtacagtccatgaccaatacgcgtacgacagat
gtcgaagcaacggtcaatcaaatcaaggcgctggaacgcgttggcgctgatatcgtccgt
gtctccgtaccgacgatggacgcggcagaagcgttcaaactcatcaaacagcgggttaac
gtgccgctggtggctgacatccacttcgactatcgcattgcgctgaaagtagcggaatac
ggcgtcgattgtctgcgtattaaccctggcaatatcggtaatgaagagcgtattcgcatg
gtggttgactgtgcgcgcgataaaaacattccgatccgtattggcgttaacgccggatcg
ctggaaaaagatctgcaagaaaagtatggcgaaccgacgccgcaggcgttgctggaatcc
gccatgcgtcatgttgatcatctcgatcgcctgaacttcgatcagttcaaagtcagcgtg
aaagcgtctgacgtcttcctcgctgttgagtcttatcgtttgctggcaaaacagatcgat
cagccgctgcatctggggatcaccgaagccggtggtgcacgcagcggggcagtaaaatcc
gccattggtttaggtctgctgctgtctgaaggcatcggcgacacgctgcgcgtatcgctg
gcggccgatccggtcgaagagatcaaagtcggtttcgatattttgaaatcgctgcgtatc
cgttcgcgagggatcaacttcatcgcctgcccgacctgttcgcgtcaggaatttgatgtt
atcggtacggttaacgcgctggagcaacgcctggaagatatcatcactccgatggacgtt
tctattatcggctgcgtggtgaatggcccaggtgaggcgctggtttctacactcggcgtc
accggcggcaacaagaaaagcggcctctatgaagatggcgtgcgcaaagaccgtctggac
aacaacgatatgatcgaccagctggaagcacgcattcgtgcgaaagccagtcagctggat
gaagcgcgtcgaattgacgttcagcaggttgaaaaataa
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