Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101036422
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Entry
101036422 CDS
T04350
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbq04040
]
101036422 (SCN11A)
Ion channels [BR:
sbq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101036422 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
101036422
NCBI-ProteinID:
XP_010339932
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKKKSKDQTGEVPQPRPQLDLKVSR
KLPKLYGNIPRDLIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRISVHSLFSMFIISTVIINCVFMASGLGKTSNSNDTDIAEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSLVIGTAMVSYWCIGINLLSLRTFRVLRALKAISVVSRLKV
IVGALLRSVKKLINVIILTLFCLSIFALVGQQLFMGSLNLKCVRRDCRNVSNQEACEDSG
PCFFPEYCFEKKENSTEFRMCGTWMGNSSCSSQYECMHTTINPDYNYTNFDNFGWSFLAM
FRLMTQDSWEKLYQQTLRTTGHYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAA
EIEAKEKMFQEAQQLLKEEKEALVAMGIDRSSLTSLETSHFSPQKRKLFGNKKKKSLFMR
EPGKDQPPGSDSDEDAQKTPQLLEQTKRLSHNLSLDHFDEHRDPLQRQRALSAVSILTIT
MKEQEKLQEPCLPCGENLASKYLMWNCCPQWVGIKKVLRIVMTDPFTELAITICIIINTV
FLAMEHHKMEPSFEKMLNTGNLVFTSIFLAEMCLKIIALDPYHYFRRGWNVFDSIVALLS
FADVLNGILQKKSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLAIVI
FIFSVAGMQLFGSSFNSQKSAKLCDPTDPTVSCLRHWHMGDFWHSFLVVFRILCGEWIEN
MWECMQEANTPLCVIVFILITVVGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQL
ALDRFHWAFCFVIHTLEHFFHKWCRKQKSPKQKEVTGGCAAQSKDIIPLVTEMKRGSETQ
EELGILASVPKTLGIGHDRTWLAPLAEEEDDVEFAGGDNAQPITQPEAEQQVRRFTHRLR
GHKKLELPQGLSCCLPCCRIDKRKSPWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGA
LIFEDVHLERQPKIQKLLNCTDLIFTHIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIV
SVTSLIDLKELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIF
CILGVYFFSGKFWRCINGTDSVINYTIVTNKNQCESGNFSWLNQKVNFDDVGNAYLALLQ
VATFKGWMDIIHAAVDSRGKEEQPEFESSSLSYIYFVVFIIFGSFFTLNLFIGVIIDNFN
QQQKKISGQDIFMTEEQKKYYNAMKKLGSKKPLKPIPRPLNKCQGLVFDIVTSQIFDIII
IILIILNMITMMAESYNQPKATESTLDHLNWIFVVIFTVECLIKIFALRQYYFTNGWNLF
DCVVVVLSIVSTMVSILAKQDHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMM
SLPSLFNIGLLLFLVMFIYAILGMNWFSRVNPQSGIDDIFNFQTFASSMLCLFQITTSAG
WDALLSPMLRSKESCNSSSENCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATE
ESEDPLGEDDFDIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDL
PMVSGDRLHCLDILFAFTTNVLGGSDVLDSMKTMMEEKFMEANPFKKLYEPIVTTTKRKE
EERCAAVIQKAFRKHMMKVTNSDLENRPHSSLQTLCNGDLSSSGVAEGKVHCD
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatcttcccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaaaagaagtct
aaggaccagacaggagaagtgccccagccccggcctcagcttgacctgaaggtctccagg
aagttgcccaagctctatggcaacattccccgtgacctcataggaaagcccctggaagac
ctggacccgttctacagaaatcacaagacatttatggtgctaaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttggacctttcaattcaatcagaagt
ttagccattagaatctcagtccattcattgttcagcatgttcattatcagcaccgttatc
atcaactgtgtgttcatggctagcgggcttggtaaaaccagcaacagtaacgatactgac
attgccgagtatgtcttcactggaatttatatttttgaagctttgattaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
cttgtcattggaacagcgatggtgtcatactggtgcatcggcatcaacctgctgtccctg
cgcaccttccgtgtgctgagagctttgaaagccatttcagtagtttcacgtctgaaggtc
atcgtgggagccttgctacgctctgtgaagaagctgatcaatgtgattatcctcaccctc
ttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagtctgaacctg
aaatgtgtccggcgcgactgcagaaacgtcagtaaccaggaagcttgtgaggactcgggc
ccttgtttctttccagaatattgctttgaaaagaaagaaaattcgactgaattcagaatg
tgtggcacttggatgggtaacagttcctgttcctcacaatatgaatgtatgcacaccaca
attaatcctgactataattacacgaattttgacaactttggctggtcttttcttgccatg
ttccggcttatgacccaagattcctgggagaagctctatcaacagaccctgcgtactact
gggcactattcagtcttcttcttcattgtggtcatcttcctgggctctttctatctcatt
aacttaaccctggctgttgtcaccatggcgtatgaggagcagaacaagaatgtagctgca
gagatagaggccaaggaaaagatgtttcaggaagcccagcagctgttaaaggaggaaaag
gaggctctggttgccatgggaattgacagaagttcacttacttcccttgaaacatcacat
ttttccccccaaaagagaaagctctttggtaataagaaaaagaagtccttgtttatgaga
gagcctgggaaagaccagccaccagggtcagattctgatgaagatgcccaaaaaacgcca
cagctcctagagcaaaccaaacgactgtcccataatctatcactggaccactttgatgag
cacagagatcctctccaaaggcagcgagcgctgagtgccgtgagcatcctcaccatcacc
atgaaggaacaagaaaagttacaagagccttgtctcccatgcggggaaaacctggcatcc
aaatacctcatgtggaactgttgcccccagtgggttggcattaagaaggtcctgagaatc
gtgatgactgacccctttactgagctggccatcaccatctgcatcatcatcaatactgtc
ttcctggccatggagcatcacaagatggaacccagttttgagaagatgttgaatacaggg
aatttggttttcactagcatttttttagcagaaatgtgcctaaaaatcattgcactcgat
ccctaccactactttcgccgaggctggaacgtctttgacagcatcgttgctcttctgagt
tttgcagatgtactgaacggtatacttcaaaagaaaagctggccattcttgcgctccttc
agagtgctcagggtcttcaagttagccaaatcctggccaactctgaacacactaattaag
ataatcggcaactctgttggagcccttggaagcctgactgtggtccttgccatagtgatc
tttattttctcagtagctggcatgcagctttttggttctagcttcaactcccaaaagagt
gcaaaattatgtgacccgacagacccgacagtctcatgtttacggcactggcacatgggg
gatttctggcactccttcctagtggtattccgcatcctctgtggggaatggatcgaaaac
atgtgggaatgtatgcaagaggcgaacacgccactgtgtgttattgtcttcatattgatc
acggtggtaggaaaacttgtggtgctcaacctcttcattgccttactgctcaattccttt
agcaatgaggaaagaaatggaaacttagaaggagaggccaggaaaactaaagtccagtta
gcactggatcgattccactgggctttttgttttgtgatacacactcttgagcatttcttc
cataagtggtgccggaagcaaaagtcaccaaagcaaaaagaggtgacaggaggctgcgct
gcacaaagcaaagacatcattcccctggtcacagagatgaaaaggggctcagagacccag
gaggagcttggtattctagcctctgtaccaaagaccttgggcatcgggcacgatcggact
tggttggctccacttgcagaggaggaagatgatgttgaatttgctggtggagataatgca
cagcctatcacacaacctgaggctgaacagcaggtacgaaggttcacacataggcttaga
ggccataaaaagctggagctgccacaaggccttagttgctgccttccatgctgtcgcata
gacaagagaaagtctccctgggtcatttggtggaacctgcggaaaacctgctaccaaata
gtgaaacacagctggtttgagagctttattatctttgtgattctgctgagcagtggggcg
ctgatatttgaagatgttcaccttgagcgacaaccaaaaatccaaaaattactaaattgt
actgacttgatttttacacatatttttatcctggagatggtactaaaatgggtagccttc
ggatttggaaagtatttcaccagtgcctggtgctgccttgacttcatcattgtgattgtc
tctgtgaccagcctcattgacttaaaggaattgaagtccttccggacgctgcgagcactg
aggcctcttcgcgcgctgtcccagtttgaaggaatgaaggtggtggtcaatgctctcata
ggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctggctcatattt
tgtatcctgggagtatacttcttttctggaaaattttggagatgcattaatggaacagac
tcagttataaattataccatagtaacgaataaaaatcaatgcgaaagtggcaatttctct
tggctcaaccagaaagtcaatttcgatgatgtgggaaatgcttacctcgctctgctgcaa
gtggcaacatttaagggctggatggacattatacatgcagctgttgattccagaggtaaa
gaagaacagccagagtttgagagcagttcactcagttacatttacttcgtagtctttatc
atctttggctcattcttcaccctgaatctcttcattggtgttattattgacaacttcaac
caacagcagaaaaagataagtggccaagacatttttatgacggaagaacagaagaaatac
tataatgcaatgaaaaaattaggatccaaaaaacctttaaaacccattccacggcctctg
aacaaatgtcaaggtctcgtgtttgacatagtcacaagtcagatctttgatatcatcatc
ataattctcattatcctaaacatgattaccatgatggctgaatcgtacaaccagcccaaa
gctacggagtccacccttgaccatctcaactggatctttgtggtcatctttacagtagaa
tgtctcatcaaaatctttgctttgaggcaatactacttcaccaatggctggaatttattt
gattgtgtggtcgtggttctttctattgttagtacaatggtttctatcttggcaaagcag
gaccacattcctttccctccaacactcttcagaattgttcgcttggcgcggatcggccga
atcctgagacttgtccgggctgcacgagggatcaggactctcctctttgctctgatgatg
tcacttccttctctgttcaacattggtcttctactctttctggttatgtttatctatgcc
attttgggtatgaactggttttccagagtaaatccacagtctggaattgatgatatattc
aacttccaaacttttgccagcagcatgctctgtctcttccagataaccacatcagcaggt
tgggatgccctgctcagccccatgctgcgatcaaaagaatcatgtaactcctcctcagaa
aactgccatctccctggcatagccacatcctactttgtcagttacatcatcatctccttt
ctcattgttgtcaatatgtacattgctgtgattttagagaacttcaatacagccactgaa
gaaagtgaggaccctttgggtgaagatgactttgacatattctatgaagtgtgggaaaag
tttgacccagaagcaacacaatttatcaaatattctgccctttctgattttgctgatgcc
ttgcctgagcctttgcgtgtggcaaagccaaataaatatcaatttctagtaatggacttg
cccatggtgagtggagatcgcctccactgcctggatattcttttcgctttcaccactaat
gtactcggtggctctgatgtcttggatagcatgaaaacaatgatggaagagaagtttatg
gaagccaatcctttcaagaagttgtatgaacccatagtcaccaccaccaagagaaaggaa
gaagaaagatgtgctgctgttattcaaaaggcctttcgaaagcacatgatgaaggtgacc
aacagtgacttggaaaacaggcctcattcatcacttcagactctttgcaatggagacttg
tccagctctggggtagccgagggcaaggtccactgtgactga
DBGET
integrated database retrieval system
