Shewanella baltica OS117: Sbal117_3371
Help
Entry
Sbal117_3371 CDS
T02013
Name
(GenBank) diguanylate cyclase/phosphodiesterase with extracellular sensor
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sbs
Shewanella baltica OS117
Brite
Enzymes [BR:
sbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Sbal117_3371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
CHASE5
CHASE8
Motif
Other DBs
NCBI-ProteinID:
AEH15050
UniProt:
A0A7U3ZD51
LinkDB
All DBs
Position
3887238..3889292
Genome browser
AA seq
684 aa
AA seq
DB search
MTGRFKSLTWKQTNLVVFTALFFAIAIFIVEIALVVVSTKQQLTTTQQELLDSVEQPAAN
AVWALDDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNNSQTFISLSNKLFDD
LKEISRPLYRPFYFEGTQQQQLIGTLTVFYDTQELTNTLFSQLRFSFFATLARALLLTLV
LSVVFHRFLTQPIARISEAIDKIEPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQ
TQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSLGH
ALGDQFLARIARILERFVGDKGTVSRLGGDEFVILADTVHTPDQAADFVDKLLIQLNVPI
QLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAV
RLRTEASLHDALKNNEFLLYFQPKLDLQTGKVIACEALIRWQKDGRLISPVSFIPVAEET
GIIIPIGRWVIEQSCKVLREWQKKYNYAIPIAINVASQQFADASLVPDIKQMALRYQIQP
ELLEIEITETSLMNDIELAIAKLEQLKSAGFSIAVDDFGTGYSSLSYLRHLPITTMKIDR
CFVSDLPGDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKENQCQVGQGFYFSQPLPQ
AEFEAQYIATQTATISSLDGLRGA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacaggccgttttaagtcactgacgtggaaacaaactaacctagtcgtatttactgcc
ctattttttgccattgccatttttattgttgaaatcgctttagtcgtcgtctcaaccaaa
caacaactcacgactacgcagcaagaactccttgattcagttgaacaacccgcagcaaat
gccgtctgggcattggatgacaatttagcccgtcaaaccttagaaggtgccattaaggtt
gagcatgtcggctcagcagtgattgagctggacgatggttccatgtttgtgtcagtcagc
aataataaaaagaataactcgcagacatttatcagcttaagtaacaaattatttgatgat
cttaaagaaatctctcgcccgctgtaccgacctttttatttcgaaggcacccaacaacag
caactcattggcacattaacggttttctacgatacccaagagctgacaaacacccttttc
tcacagttaagatttagttttttcgccacacttgcccgcgcactcttactcaccttagtg
ctttcagtggttttccatcgtttcttgactcaacctatcgcgcgtatcagtgaggccata
gataagattgaacccgactcaccggacgaaaatctcttacctatgtccaatgcgcacaag
gatgatgaactcggcctagtgacctcgaaattcaaccaaattcttatccaatttagccaa
acccaatccaaactgcgcaaaatggcgacccgagatccgctaacgggtttaccgaaccgc
acattattgctcgaaaccatcgcagtcactatccaacgttcgcgcgtgcacaaacgcagc
tttgccttaatgtttatcgacttagatcgatttaagaatattaacgattcccttggccac
gcattaggcgatcaattcctcgcccgtatcgcccgtattcttgaacgcttcgttggcgat
aaaggcacagtctctcgcttaggtggcgatgagtttgtgattttagccgacacagtacac
accccagatcaagccgctgactttgttgataagttacttatccagcttaatgtccctatc
caattaaatgaacatgcgattcatcctgcggcctcaattggcatatccatttatcccgaa
gacggtaacagcgcagaagatttgatacgtcatgccgatattgccatgtacagcgccaaa
gctgcaggctccaatcaatgggccttctttaaacaacagatgacagaacgcgccgctgtg
cgtttacgcactgaagcatccttgcatgatgcgttaaaaaacaacgaatttttgctgtat
ttccaacctaaactcgatctgcaaacgggcaaagtgattgcctgtgaagctctgatccgc
tggcaaaaagatgggcgactcatcagtccggtttcttttattcccgtagccgaagaaacg
gggatcatcattccgattggccgctgggtgatagaacaaagctgcaaagtcttaagggag
tggcaaaagaaatataactatgccatcccgattgcgattaatgtcgcctcacagcaattc
gccgacgccagtttagtacccgatatcaaacagatggcattacgttatcagatccagcct
gagctactggaaattgaaatcactgaaacctcgctgatgaacgacattgagctcgccatc
gctaagcttgaacaacttaaatcagcagggtttagtattgccgtcgatgacttcggcacc
ggatattcatcactctcttacctgcgccatttgcccatcaccaccatgaaaatcgaccgc
tgtttcgtgtccgatttaccaggggatagcgcaattgcatcgaccattttgatgttaggt
aagcagcttaatttgaccattgtggccgaagggattgaaaacgagcaacaattggattgg
ttgaaggagaatcagtgccaagtcggccaaggtttctattttagccaacccctgccccaa
gcggaatttgaagcccagtatatagcaacacagacagcaacgataagcagtcttgatggc
ttacgtggagcttag
DBGET
integrated database retrieval system
